Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G040700.1 | Wheat | extracellular, plasma membrane, vacuole | 93.7 | 93.7 |
| TraesCS4A01G273300.1 | Wheat | cytosol, plasma membrane, plastid | 85.15 | 92.4 |
| HORVU0Hr1G031790.1 | Barley | cytosol | 39.64 | 84.73 |
| HORVU4Hr1G006450.1 | Barley | cytosol | 82.35 | 84.12 |
| TraesCS6D01G119000.1 | Wheat | plasma membrane | 30.81 | 72.37 |
| HORVU4Hr1G006540.1 | Barley | extracellular | 33.33 | 70.62 |
| TraesCS6D01G119500.1 | Wheat | extracellular, plasma membrane, vacuole | 70.17 | 70.37 |
| TraesCS6D01G118900.1 | Wheat | extracellular | 69.19 | 69.58 |
| TraesCS6D01G119600.1 | Wheat | plasma membrane | 67.93 | 68.02 |
| TraesCS6D01G119100.1 | Wheat | cytosol, golgi, peroxisome | 37.82 | 67.16 |
| TraesCS6D01G116900.1 | Wheat | extracellular, plasma membrane | 59.52 | 61.15 |
| TraesCS6D01G117600.1 | Wheat | cytosol, golgi, peroxisome | 55.6 | 60.15 |
| TraesCS7D01G441600.1 | Wheat | cytosol, plasma membrane | 38.52 | 58.76 |
| TraesCS6D01G117200.1 | Wheat | plasma membrane | 57.42 | 58.66 |
| TraesCS6D01G116700.1 | Wheat | plasma membrane | 58.82 | 58.5 |
| TraesCS6D01G116800.1 | Wheat | vacuole | 30.11 | 58.11 |
| TraesCS6D01G117900.1 | Wheat | plasma membrane, vacuole | 37.82 | 57.57 |
| Os02t0155700-00 | Rice | plasma membrane | 48.32 | 57.02 |
| TraesCS6D01G116500.1 | Wheat | plasma membrane | 56.86 | 57.02 |
| TraesCS6D01G117400.1 | Wheat | plasma membrane, vacuole | 56.72 | 56.96 |
| TraesCS6D01G118000.1 | Wheat | plastid | 58.68 | 56.7 |
| EES06303 | Sorghum | plasma membrane | 57.84 | 56.19 |
| TraesCS6D01G081500.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 37.82 | 55.79 |
| TraesCS6D01G115800.1 | Wheat | plasma membrane | 57.7 | 55.45 |
| TraesCS7D01G401700.1 | Wheat | golgi, vacuole | 48.18 | 54.26 |
| TraesCS6D01G116600.1 | Wheat | plastid | 43.28 | 53.65 |
| TraesCS7D01G425500.1 | Wheat | plasma membrane | 52.52 | 52.59 |
| TraesCS6D01G119400.1 | Wheat | plastid | 52.94 | 52.43 |
| TraesCS7D01G425600.1 | Wheat | plasma membrane | 52.8 | 51.22 |
| TraesCS6D01G115200.2 | Wheat | plasma membrane | 60.64 | 41.2 |
| TraesCS6D01G115700.1 | Wheat | plasma membrane | 60.36 | 40.7 |
| TraesCS6D01G114600.1 | Wheat | plasma membrane | 59.38 | 40.34 |
| TraesCS6D01G115100.1 | Wheat | plasma membrane | 59.24 | 40.25 |
| TraesCS6D01G114800.1 | Wheat | plasma membrane | 59.38 | 39.92 |
| TraesCS6D01G116100.1 | Wheat | plasma membrane | 58.4 | 39.71 |
| TraesCS6D01G115300.1 | Wheat | plasma membrane | 57.98 | 39.47 |
| TraesCS6D01G115900.1 | Wheat | plasma membrane | 56.58 | 39.26 |
| TraesCS6D01G115400.1 | Wheat | plasma membrane | 57.98 | 39.13 |
| TraesCS7D01G426000.1 | Wheat | plasma membrane | 54.48 | 36.59 |
| TraesCS6D01G115000.1 | Wheat | plasma membrane | 50.7 | 36.46 |
| AT1G17240.2 | Thale cress | plasma membrane | 37.4 | 36.38 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 34.73 | 36.36 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 34.59 | 36.22 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 34.45 | 36.07 |
| TraesCS6D01G116000.1 | Wheat | plasma membrane | 43.56 | 35.67 |
| AT1G17250.1 | Thale cress | plasma membrane | 36.97 | 34.92 |
| CDX81812 | Canola | extracellular, plasma membrane | 24.79 | 32.9 |
| TraesCS2D01G551600.1 | Wheat | extracellular, plasma membrane, vacuole | 33.33 | 31.95 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 6.02 | 31.62 |
| TraesCS2D01G551700.1 | Wheat | plastid | 25.49 | 31.43 |
| TraesCS2D01G551800.1 | Wheat | extracellular, plasma membrane | 32.77 | 30.75 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 12.04 | 29.86 |
| TraesCS7D01G425700.1 | Wheat | plasma membrane | 44.26 | 29.21 |
| CDY48482 | Canola | plasma membrane | 27.59 | 28.68 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 42.58 | 28.2 |
| KRH06301 | Soybean | plasma membrane | 40.9 | 27.42 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 35.43 | 27.29 |
| KRH47735 | Soybean | plasma membrane | 37.4 | 26.92 |
| KRH68996 | Soybean | plasma membrane | 36.83 | 26.57 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 39.22 | 25.74 |
| Bra008027.1-P | Field mustard | plasma membrane | 38.1 | 25.26 |
| Bra016068.1-P | Field mustard | plasma membrane | 38.38 | 25.21 |
| CDX96394 | Canola | plasma membrane | 38.38 | 25.18 |
| CDX82157 | Canola | plasma membrane | 37.96 | 25.16 |
| AT1G72300.1 | Thale cress | plasma membrane | 37.96 | 24.75 |
| TraesCS2D01G263500.1 | Wheat | plasma membrane | 34.17 | 23.97 |
| TraesCS2D01G551200.1 | Wheat | plasma membrane | 34.87 | 23.85 |
| TraesCS6D01G052100.1 | Wheat | plasma membrane | 35.99 | 23.84 |
| CDY03644 | Canola | plasma membrane | 28.01 | 23.18 |
| TraesCS6D01G213000.1 | Wheat | plasma membrane | 33.75 | 22.91 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.14 | 0.98 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 |
| PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF12 | SMART:SM00369 |
| SUPFAM:SSF52047 | SUPFAM:SSF52058 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4D01G038100 | EnsemblPlants:TraesCS4D01G038100.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:16447199..16449343
Molecular Weight (calculated)
78228.7 Da
IEP (calculated)
6.810
GRAVY (calculated)
0.167
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSTALVGLQ LFLLLLSLAS PASSCTEQEE HSLLQFLTGL SQDAGLAVSW RNGTDCCKWE GITCNRDGDV TEVSLASRGL EGRISPHLAG LTGLLCVNLS
101: HNSFSGGLPP ELMYSRSIIV LDVSFSRLSG VLHEPPSSVT TTLPLQVLNI SSNQFGAEFP SHTWKVMQNL VVLNASNNSF TGHILPSLCL SPSLAVLDLC
201: YNQLSGGIPA ALGDCSMLKV FKVGHNKLSG TLPVELFHAT SLEHLSIPNN GLQGELDGAN MVKLSNLVTL DLRENKFSGK IPGSIGQLKR LEELYLGNNN
301: MSGEVPSTLS NCTRLMIIDL KINNFSGDLG RVNFSTLQNL THLDVLRNNF SGIVPESIYS CSNLIALRVS LNHFHGEISP RIGNLHLSFL SLARNPFTNI
401: TKAFHVFNGF RNITTLIIAE NFVNEMMPQD ETLDGFRNLQ YIHMADSALT GHLPVWLPKL RNLKVLKLSN NRLTGPMPSW INSLHSLFYL DVSNNSFAGQ
501: IPIALMEIPM LKDNTAAYLD PGHVELPLFW RNISRQYHFL TAFPTLLNLG INNFTGVIPS EIGQLKVLSE LDFSSNKLYG LVPLSICNLT KLEVLDLSNN
601: HLRGVIPAAL ESLHFLSALN ISNNDLEGPV PTGGQLSTFP DSSFDGNPKL CGTMLIHQCS SVRAHPIYII SAKQPSVKVI FFIAFGLFFG VGVIYDQLVL
701: YRYFGSAHFN CNLF
101: HNSFSGGLPP ELMYSRSIIV LDVSFSRLSG VLHEPPSSVT TTLPLQVLNI SSNQFGAEFP SHTWKVMQNL VVLNASNNSF TGHILPSLCL SPSLAVLDLC
201: YNQLSGGIPA ALGDCSMLKV FKVGHNKLSG TLPVELFHAT SLEHLSIPNN GLQGELDGAN MVKLSNLVTL DLRENKFSGK IPGSIGQLKR LEELYLGNNN
301: MSGEVPSTLS NCTRLMIIDL KINNFSGDLG RVNFSTLQNL THLDVLRNNF SGIVPESIYS CSNLIALRVS LNHFHGEISP RIGNLHLSFL SLARNPFTNI
401: TKAFHVFNGF RNITTLIIAE NFVNEMMPQD ETLDGFRNLQ YIHMADSALT GHLPVWLPKL RNLKVLKLSN NRLTGPMPSW INSLHSLFYL DVSNNSFAGQ
501: IPIALMEIPM LKDNTAAYLD PGHVELPLFW RNISRQYHFL TAFPTLLNLG INNFTGVIPS EIGQLKVLSE LDFSSNKLYG LVPLSICNLT KLEVLDLSNN
601: HLRGVIPAAL ESLHFLSALN ISNNDLEGPV PTGGQLSTFP DSSFDGNPKL CGTMLIHQCS SVRAHPIYII SAKQPSVKVI FFIAFGLFFG VGVIYDQLVL
701: YRYFGSAHFN CNLF
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.