Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G155600.1 | Wheat | vacuole | 98.33 | 90.77 |
| HORVU6Hr1G024590.1 | Barley | cytosol, golgi, peroxisome | 34.39 | 81.36 |
| TraesCS6A01G127300.1 | Wheat | extracellular, plasma membrane, vacuole | 82.42 | 75.87 |
| TraesCS6A01G127400.1 | Wheat | extracellular, plasma membrane, vacuole | 82.12 | 75.8 |
| TraesCS6D01G116700.1 | Wheat | plasma membrane | 73.03 | 67.13 |
| TraesCS6D01G081500.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 47.27 | 64.46 |
| TraesCS7D01G441600.1 | Wheat | cytosol, plasma membrane | 45.45 | 64.1 |
| TraesCS6D01G116900.1 | Wheat | extracellular, plasma membrane | 65.45 | 62.16 |
| TraesCS6D01G116600.1 | Wheat | plastid | 53.33 | 61.11 |
| TraesCS6D01G117900.1 | Wheat | plasma membrane, vacuole | 43.03 | 60.55 |
| TraesCS6D01G116500.1 | Wheat | plasma membrane | 65.3 | 60.53 |
| TraesCS6D01G117200.1 | Wheat | plasma membrane | 62.12 | 58.66 |
| TraesCS6D01G117400.1 | Wheat | plasma membrane, vacuole | 62.42 | 57.95 |
| TraesCS6D01G119100.1 | Wheat | cytosol, golgi, peroxisome | 35.0 | 57.46 |
| TraesCS6D01G119500.1 | Wheat | extracellular, plasma membrane, vacuole | 61.21 | 56.74 |
| TraesCS6D01G116800.1 | Wheat | vacuole | 31.67 | 56.49 |
| TraesCS6D01G118000.1 | Wheat | plastid | 62.88 | 56.16 |
| TraesCS6D01G115800.1 | Wheat | plasma membrane | 63.18 | 56.12 |
| TraesCS6D01G118900.1 | Wheat | extracellular | 60.3 | 56.06 |
| TraesCS6D01G119600.1 | Wheat | plasma membrane | 60.3 | 55.82 |
| TraesCS4D01G038100.1 | Wheat | extracellular | 60.15 | 55.6 |
| TraesCS6D01G119000.1 | Wheat | plasma membrane | 24.09 | 52.3 |
| TraesCS7D01G401700.1 | Wheat | golgi, vacuole | 49.85 | 51.89 |
| TraesCS6D01G119400.1 | Wheat | plastid | 55.91 | 51.18 |
| TraesCS7D01G425600.1 | Wheat | plasma membrane | 56.67 | 50.82 |
| TraesCS7D01G425500.1 | Wheat | plasma membrane | 54.7 | 50.63 |
| TraesCS6D01G115400.1 | Wheat | plasma membrane | 74.24 | 46.31 |
| TraesCS6D01G115700.1 | Wheat | plasma membrane | 73.33 | 45.7 |
| TraesCS6D01G115100.1 | Wheat | plasma membrane | 71.06 | 44.62 |
| TraesCS6D01G115900.1 | Wheat | plasma membrane | 68.48 | 43.93 |
| TraesCS6D01G115200.2 | Wheat | plasma membrane | 69.09 | 43.39 |
| TraesCS6D01G116100.1 | Wheat | plasma membrane | 68.64 | 43.14 |
| Os02t0153700-01 | Rice | plasma membrane | 66.21 | 41.74 |
| TraesCS6D01G115300.1 | Wheat | plasma membrane | 66.21 | 41.66 |
| Os02t0154000-00 | Rice | plasma membrane | 65.45 | 41.3 |
| TraesCS6D01G114600.1 | Wheat | plasma membrane | 64.09 | 40.25 |
| TraesCS6D01G114800.1 | Wheat | plasma membrane | 63.94 | 39.74 |
| TraesCS6D01G115000.1 | Wheat | plasma membrane | 57.42 | 38.17 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 39.24 | 37.98 |
| TraesCS6D01G116000.1 | Wheat | plasma membrane | 50.0 | 37.84 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 38.94 | 37.68 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 38.79 | 37.54 |
| TraesCS7D01G426000.1 | Wheat | plasma membrane | 58.94 | 36.59 |
| AT1G17240.2 | Thale cress | plasma membrane | 40.45 | 36.38 |
| AT1G17250.1 | Thale cress | plasma membrane | 40.0 | 34.92 |
| CDX81812 | Canola | extracellular, plasma membrane | 27.73 | 34.01 |
| TraesCS2D01G551700.1 | Wheat | plastid | 28.64 | 32.64 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 13.94 | 31.94 |
| TraesCS2D01G551600.1 | Wheat | extracellular, plasma membrane, vacuole | 35.61 | 31.54 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 6.36 | 30.88 |
| TraesCS2D01G551800.1 | Wheat | extracellular, plasma membrane | 34.55 | 29.96 |
| CDY48482 | Canola | plasma membrane | 29.85 | 28.68 |
| TraesCS7D01G425700.1 | Wheat | plasma membrane | 45.91 | 28.0 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 45.15 | 27.64 |
| KRH06301 | Soybean | plasma membrane | 44.09 | 27.32 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 37.73 | 26.86 |
| KRH47735 | Soybean | plasma membrane | 40.3 | 26.81 |
| KRH68996 | Soybean | plasma membrane | 39.55 | 26.36 |
| Bra008027.1-P | Field mustard | plasma membrane | 41.52 | 25.44 |
| Bra016068.1-P | Field mustard | plasma membrane | 41.67 | 25.3 |
| CDX96394 | Canola | plasma membrane | 41.67 | 25.28 |
| CDX82157 | Canola | plasma membrane | 41.21 | 25.26 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 41.06 | 24.91 |
| AT1G72300.1 | Thale cress | plasma membrane | 40.45 | 24.38 |
| TraesCS6D01G052100.1 | Wheat | plasma membrane | 39.24 | 24.03 |
| TraesCS2D01G263500.1 | Wheat | plasma membrane | 36.97 | 23.97 |
| TraesCS2D01G551200.1 | Wheat | plasma membrane | 36.82 | 23.28 |
| TraesCS6D01G213000.1 | Wheat | plasma membrane | 35.76 | 22.43 |
| CDY03644 | Canola | plasma membrane | 28.94 | 22.13 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 |
| PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF7 | SMART:SM00369 |
| SUPFAM:SSF52047 | SUPFAM:SSF52058 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6D01G117600 | EnsemblPlants:TraesCS6D01G117600.1 | SEG:seg |
Description
No Description!
Coordinates
chr6D:-:83203099..83205081
Molecular Weight (calculated)
72409.8 Da
IEP (calculated)
6.827
GRAVY (calculated)
0.029
Length
660 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSWRNDTDC CRWEGITCSP NRTVTDVELA SRGLEGSISP FLGNLTGLLR LNLSRNSLSG SLPLELVSSS SIIVLDVSFN RLTGALHELS SSTPARPLQV
101: LNISSNLLAG PFPSTIWKTM DNLITLNASN NSFTGAIPTY FCNSSPYFTV LDLCFNKFSG SIPPGLGECS MLRVIKAGYN NLSGTLPDEL FNATSLEYLS
201: FPNNNLHGVI DSARIISLIN LRTLDLGWNN FNGRIPDSIG QLKRLEEFHL HYNNLSGELP STLSNCTNLV RIGLRSNKFS GELINVNFSN LPNLKTLDLW
301: SNFFTGTVPE SMYSCSNLTA LRLSRNNLHG QLSSRIGNLK YLSFLSLGGN NFTNITNALQ ILKSSKNLSS LLIAHNFRGE LMPQDDRIDG FENLQVLDMD
401: GCQLSGNIPL WISRVTNLEV LILRSNQLTG PMPGWINSLN HLSYIDVSNN NLKGEIPLAL MEMPVLKSTD NSNHLDPWVF NLPVYSGPTL QYRVFTSFPK
501: ALNLSNNNFT GVIPPLIDQL KKLGVLDFSF NKLSGQIPQS ICNLTKLRVL DLSSNNLIGA IPAALNSLHF LAAFNISDND LEGPIPSGGQ FNTFETSSFD
601: GNTKLCGSML IHKCGSVEAP PATILSTKQT DYKVAFAIAF SVFFGVGVLY DQIVLSRYFG
101: LNISSNLLAG PFPSTIWKTM DNLITLNASN NSFTGAIPTY FCNSSPYFTV LDLCFNKFSG SIPPGLGECS MLRVIKAGYN NLSGTLPDEL FNATSLEYLS
201: FPNNNLHGVI DSARIISLIN LRTLDLGWNN FNGRIPDSIG QLKRLEEFHL HYNNLSGELP STLSNCTNLV RIGLRSNKFS GELINVNFSN LPNLKTLDLW
301: SNFFTGTVPE SMYSCSNLTA LRLSRNNLHG QLSSRIGNLK YLSFLSLGGN NFTNITNALQ ILKSSKNLSS LLIAHNFRGE LMPQDDRIDG FENLQVLDMD
401: GCQLSGNIPL WISRVTNLEV LILRSNQLTG PMPGWINSLN HLSYIDVSNN NLKGEIPLAL MEMPVLKSTD NSNHLDPWVF NLPVYSGPTL QYRVFTSFPK
501: ALNLSNNNFT GVIPPLIDQL KKLGVLDFSF NKLSGQIPQS ICNLTKLRVL DLSSNNLIGA IPAALNSLHF LAAFNISDND LEGPIPSGGQ FNTFETSSFD
601: GNTKLCGSML IHKCGSVEAP PATILSTKQT DYKVAFAIAF SVFFGVGVLY DQIVLSRYFG
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.