Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G024590.1 | Barley | cytosol, golgi, peroxisome | 32.87 | 84.23 |
| TraesCS6A01G128300.1 | Wheat | cytosol | 32.73 | 83.87 |
| TraesCS6B01G155600.1 | Wheat | vacuole | 82.66 | 82.66 |
| TraesCS6A01G127300.1 | Wheat | extracellular, plasma membrane, vacuole | 82.52 | 82.29 |
| TraesCS6D01G117600.1 | Wheat | cytosol, golgi, peroxisome | 75.8 | 82.12 |
| TraesCS6A01G128200.1 | Wheat | vacuole | 34.97 | 80.39 |
| TraesCS7A01G452500.1 | Wheat | plasma membrane | 67.83 | 66.99 |
| TraesCS6A01G128500.1 | Wheat | extracellular | 41.26 | 66.14 |
| TraesCS6A01G126400.1 | Wheat | plasma membrane | 66.71 | 65.79 |
| TraesCS6A01G127500.1 | Wheat | plasma membrane | 64.06 | 63.79 |
| TraesCS6A01G128100.1 | Wheat | plasma membrane | 62.8 | 63.15 |
| TraesCS6A01G128400.1 | Wheat | plasma membrane | 62.38 | 62.73 |
| TraesCS6A01G126900.1 | Wheat | plasma membrane, vacuole | 61.96 | 62.31 |
| TraesCS6A01G126200.1 | Wheat | plasma membrane | 61.68 | 61.59 |
| TraesCS6A01G130000.1 | Wheat | cytosol, golgi, peroxisome | 56.22 | 60.82 |
| TraesCS6A01G129900.1 | Wheat | extracellular, plasma membrane | 59.16 | 59.24 |
| TraesCS7A01G408300.1 | Wheat | vacuole | 25.31 | 59.15 |
| TraesCS6A01G130200.1 | Wheat | extracellular | 58.6 | 59.1 |
| TraesCS6A01G129600.1 | Wheat | extracellular | 58.32 | 58.73 |
| TraesCS4A01G273300.1 | Wheat | cytosol, plasma membrane, plastid | 53.71 | 58.36 |
| TraesCS6A01G126700.1 | Wheat | cytosol, golgi, peroxisome | 38.32 | 58.3 |
| TraesCS6A01G129700.1 | Wheat | extracellular, plasma membrane, vacuole | 57.76 | 58.01 |
| TraesCS6A01G128600.1 | Wheat | cytosol, extracellular, golgi | 12.03 | 55.13 |
| TraesCS6A01G125200.1 | Wheat | plasma membrane | 70.21 | 54.39 |
| TraesCS6A01G124700.1 | Wheat | plasma membrane | 70.77 | 48.14 |
| TraesCS6A01G125000.1 | Wheat | plasma membrane | 69.79 | 47.16 |
| TraesCS6A01G125400.3 | Wheat | plasma membrane | 67.27 | 46.93 |
| Os02t0153700-01 | Rice | plasma membrane | 64.48 | 44.03 |
| TraesCS6A01G124800.1 | Wheat | plasma membrane | 64.76 | 44.01 |
| TraesCS6A01G125500.1 | Wheat | plasma membrane | 64.06 | 43.33 |
| Os02t0154000-00 | Rice | plasma membrane | 62.94 | 43.02 |
| TraesCS6A01G125300.1 | Wheat | plasma membrane | 62.94 | 42.57 |
| TraesCS6A01G124300.1 | Wheat | plasma membrane | 61.82 | 42.1 |
| TraesCS6A01G124500.1 | Wheat | plasma membrane | 62.52 | 42.01 |
| TraesCS6A01G125600.1 | Wheat | plasma membrane | 59.44 | 41.34 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 37.76 | 39.59 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 37.48 | 39.3 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 37.34 | 39.15 |
| AT1G17240.2 | Thale cress | plasma membrane | 40.0 | 38.96 |
| TraesCS7A01G435300.1 | Wheat | plasma membrane, plastid | 57.9 | 38.95 |
| TraesCS6A01G124600.1 | Wheat | cytosol | 39.58 | 38.24 |
| TraesCS6A01G129000.1 | Wheat | plasma membrane | 61.26 | 36.35 |
| AT1G17250.1 | Thale cress | plasma membrane | 38.32 | 36.24 |
| TraesCS2A01G550600.1 | Wheat | extracellular, vacuole | 26.99 | 35.15 |
| CDX81812 | Canola | extracellular, plasma membrane | 25.45 | 33.83 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 13.29 | 32.99 |
| TraesCS2A01G550700.1 | Wheat | extracellular | 33.71 | 32.39 |
| CDY48482 | Canola | plasma membrane | 29.65 | 30.86 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 5.73 | 30.15 |
| TraesCS7A01G435000.1 | Wheat | plasma membrane | 43.5 | 28.77 |
| KRH06301 | Soybean | plasma membrane | 42.52 | 28.54 |
| KRH47735 | Soybean | plasma membrane | 38.88 | 28.02 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 41.96 | 27.83 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 35.8 | 27.62 |
| KRH68996 | Soybean | plasma membrane | 38.18 | 27.58 |
| Bra016068.1-P | Field mustard | plasma membrane | 40.14 | 26.4 |
| CDX96394 | Canola | plasma membrane | 40.14 | 26.38 |
| Bra008027.1-P | Field mustard | plasma membrane | 39.58 | 26.28 |
| CDX82157 | Canola | plasma membrane | 39.02 | 25.91 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 39.16 | 25.74 |
| TraesCS6A01G124900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 21.54 | 25.71 |
| AT1G72300.1 | Thale cress | plasma membrane | 39.3 | 25.66 |
| TraesCS6A01G044700.1 | Wheat | plasma membrane | 37.76 | 25.02 |
| TraesCS2A01G550200.1 | Wheat | plasma membrane | 35.8 | 24.52 |
| TraesCS2A01G260000.1 | Wheat | plasma membrane | 34.69 | 24.36 |
| TraesCS6A01G222000.1 | Wheat | plasma membrane | 35.1 | 23.97 |
| CDY03644 | Canola | plasma membrane | 27.83 | 23.06 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 |
| PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF7 | SMART:SM00369 |
| SUPFAM:SSF52058 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G127400 | EnsemblPlants:TraesCS6A01G127400.1 | SEG:seg |
Description
No Description!
Coordinates
chr6A:-:100361296..100363443
Molecular Weight (calculated)
77985.0 Da
IEP (calculated)
7.480
GRAVY (calculated)
0.067
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPLSRSHRN QFPIPFFGLP IVLLVFLASP TSSCTEQEKS SLIQLLDGLL QDGGLTVSWR SDTDCCSWEG IVCSPDRRVT DVVLASHSLE GPISPFLGNL
101: IGLLRLNLSH NSLSGGLPLE LVSSSSIIVL DVSFNRLTGA LHELQSSAPD RPLQVLNISS NLLTGPFPST IWKTIDNLIA LNASNNSFTG PIPSDLCNSS
201: PFFAVLDLCF NKFSGSIPPG LGYCSMLRVL RAGYNNLSGT LPDELFNATS LEYLSFPNND LHGVLDSARM IRLRNLRILD LGWNNFNGSI PDSVGQLKRL
301: EKFQLGHNNL SGELPSTLSN CTNLKTIDLK SNKFSGGLSK VNFSNLRNLK TLDLWSDNFT GTIPESMYSC SNLTALRLSS NNLHGQLSSK ISNLKYLSFL
401: SLGKNNFTNI TNALQILKSS KNISTLLLGY IFKGEIMPQD DKIDGFENLQ VLDTGECKLS GKIPLWISRL TKLEMLVLRG NQLTGPIPGW FKSLSQLFFM
501: DVSSNHLTGE IPLTLMEMPM LKSTDNSSHL GPRVFKLPVY TGPLLQYLVV TSFPVVLNLS NNNFTGVIPP QIGQLKVLVA LDFSFNKLSG QIPKSVRNLT
601: NLQILDLSNN NLTGAIPAAL NNLHFLAAFN VSDNDLEGPI PSGGQFNTFG TSSFDGNTKL CGSMLIHKCG SAEAPTDTIL STKQTDYKVA FAIAFSAFFG
701: VGVLYDQIVL SRHFG
101: IGLLRLNLSH NSLSGGLPLE LVSSSSIIVL DVSFNRLTGA LHELQSSAPD RPLQVLNISS NLLTGPFPST IWKTIDNLIA LNASNNSFTG PIPSDLCNSS
201: PFFAVLDLCF NKFSGSIPPG LGYCSMLRVL RAGYNNLSGT LPDELFNATS LEYLSFPNND LHGVLDSARM IRLRNLRILD LGWNNFNGSI PDSVGQLKRL
301: EKFQLGHNNL SGELPSTLSN CTNLKTIDLK SNKFSGGLSK VNFSNLRNLK TLDLWSDNFT GTIPESMYSC SNLTALRLSS NNLHGQLSSK ISNLKYLSFL
401: SLGKNNFTNI TNALQILKSS KNISTLLLGY IFKGEIMPQD DKIDGFENLQ VLDTGECKLS GKIPLWISRL TKLEMLVLRG NQLTGPIPGW FKSLSQLFFM
501: DVSSNHLTGE IPLTLMEMPM LKSTDNSSHL GPRVFKLPVY TGPLLQYLVV TSFPVVLNLS NNNFTGVIPP QIGQLKVLVA LDFSFNKLSG QIPKSVRNLT
601: NLQILDLSNN NLTGAIPAAL NNLHFLAAFN VSDNDLEGPI PSGGQFNTFG TSSFDGNTKL CGSMLIHKCG SAEAPTDTIL STKQTDYKVA FAIAFSAFFG
701: VGVLYDQIVL SRHFG
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.