Factsheet for TraesCS6A01G126400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
endoplasmic reticulum 1
plasma membrane 3
vacuole 1
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G452500.1	Wheat	plasma membrane	67.45	67.54
TraesCS6A01G127400.1	Wheat	extracellular, plasma membrane, vacuole	65.79	66.71
TraesCS6A01G128300.1	Wheat	cytosol	25.66	66.67
TraesCS6A01G127300.1	Wheat	extracellular, plasma membrane, vacuole	65.66	66.39
TraesCS6A01G128200.1	Wheat	vacuole	28.28	65.92
TraesCS6A01G126200.1	Wheat	plasma membrane	63.72	64.53
TraesCS6A01G127500.1	Wheat	plasma membrane	63.17	63.79
TraesCS6A01G128500.1	Wheat	extracellular	39.17	63.68
TraesCS6A01G128400.1	Wheat	plasma membrane	58.76	59.92
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	58.48	59.63
TraesCS6A01G128100.1	Wheat	plasma membrane	58.21	59.35
TraesCS6A01G130000.1	Wheat	cytosol, golgi, peroxisome	53.52	58.7
TraesCS6A01G130200.1	Wheat	extracellular	57.24	58.53
TraesCS6A01G129700.1	Wheat	extracellular, plasma membrane, vacuole	57.38	58.43
TraesCS6A01G129900.1	Wheat	extracellular, plasma membrane	57.38	58.26
TraesCS6A01G129600.1	Wheat	extracellular	56.69	57.89
TraesCS4A01G273300.1	Wheat	cytosol, plasma membrane, plastid	51.59	56.84
TraesCS6A01G126700.1	Wheat	cytosol, golgi, peroxisome	36.69	56.6
TraesCS6A01G128600.1	Wheat	cytosol, extracellular, golgi	11.86	55.13
TraesCS7A01G408300.1	Wheat	vacuole	22.62	53.59
TraesCS6A01G125200.1	Wheat	plasma membrane	67.59	53.09
TraesCS6A01G124700.1	Wheat	plasma membrane	72.83	50.24
HORVU6Hr1G023290.1	Barley	plasma membrane	74.07	50.19
TraesCS6A01G124800.1	Wheat	plasma membrane	69.52	47.91
TraesCS6D01G115000.1	Wheat	plasma membrane	64.28	46.93
TraesCS6A01G125000.1	Wheat	plasma membrane	68.41	46.88
TraesCS6A01G125400.3	Wheat	plasma membrane	65.52	46.34
TraesCS6A01G125300.1	Wheat	plasma membrane	65.66	45.03
Os02t0153700-01	Rice	plasma membrane	62.21	43.08
TraesCS6A01G125500.1	Wheat	plasma membrane	62.76	43.05
TraesCS6A01G124500.1	Wheat	plasma membrane	62.21	42.39
TraesCS6A01G125600.1	Wheat	plasma membrane	59.45	41.93
Os02t0154000-00	Rice	plasma membrane	59.86	41.49
TraesCS6A01G124300.1	Wheat	plasma membrane	59.72	41.24
CDX96780	Canola	mitochondrion, plasma membrane	36.97	39.3
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	36.83	39.15
AT1G17240.2	Thale cress	plasma membrane	39.59	39.1
CDX83918	Canola	mitochondrion, plasma membrane	36.69	39.0
TraesCS7A01G435300.1	Wheat	plasma membrane, plastid	55.17	37.63
AT1G17250.1	Thale cress	plasma membrane	38.07	36.51
TraesCS6A01G124600.1	Wheat	cytosol	36.69	35.95
TraesCS6A01G129000.1	Wheat	plasma membrane	57.79	34.77
CDX81812	Canola	extracellular, plasma membrane	25.79	34.76
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	13.52	34.03
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	24.69	32.6
KRH06825	Soybean	cytosol, extracellular, nucleus	5.93	31.62
CDY48482	Canola	plasma membrane	29.93	31.59
TraesCS2A01G550700.1	Wheat	extracellular	31.86	31.05
Solyc03g123780.2.1	Tomato	plasma membrane	36.28	28.37
TraesCS6A01G124900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	23.31	28.21
KRH06301	Soybean	plasma membrane	41.1	27.98
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	41.52	27.92
TraesCS7A01G435000.1	Wheat	plasma membrane	41.24	27.66
KRH68996	Soybean	plasma membrane	37.38	27.37
KRH47735	Soybean	plasma membrane	37.38	27.32
Bra008027.1-P	Field mustard	plasma membrane	39.59	26.65
Bra016068.1-P	Field mustard	plasma membrane	39.86	26.59
CDX96394	Canola	plasma membrane	39.86	26.56
PGSC0003DMT400023733	Potato	plasma membrane	39.45	26.29
CDX82157	Canola	plasma membrane	39.03	26.28
AT1G72300.1	Thale cress	plasma membrane	39.17	25.94
TraesCS2A01G260000.1	Wheat	plasma membrane	34.48	24.56
TraesCS6A01G222000.1	Wheat	plasma membrane	34.76	24.07
TraesCS2A01G550200.1	Wheat	plasma membrane	34.48	23.95
CDY03644	Canola	plasma membrane	28.41	23.87
TraesCS6A01G044700.1	Wheat	plasma membrane	35.45	23.82
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR43932	PANTHER:PTHR43932:SF7	SMART:SM00369
SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G126400	EnsemblPlants:TraesCS6A01G126400.1	SEG:seg

Description

No Description!

Coordinates

chr6A:-:99929394..99931571

Molecular Weight (calculated)

79654.7 Da

IEP (calculated)

6.602

GRAVY (calculated)

-0.014

Length

725 amino acids

Sequence
(BLAST)

001: MLVSSETMQP LQFSNKTHNN KLYIPSLGLT LVLLISLASP ASSCTEQEKT SLLQFLTELS WDSGLAASWQ NNTDCCKWEG IICRQDRMVA KVMLASKGLE
101: GHISECLGNL TRLQYLNLSH NSLSGGLPLE LVSSSSITVL DVNFNQLNGT LHELPSSTPA QPLQVLNISS NLFAGQFPST TWKAMENLIA LNTSNNSFTG
201: QIPTHFCSSS RSLVVLNLCL NKFSGNILQK LGNCSKLREL RAGYNNLSGT LPDELFNTAT LEHLSFRNND LHGAIDSTRT TNLRNLVTLD LGGNRFGGKI
301: PDSIGQLKKL EEFHLDNNKF SGELPSALSN CTNLVAIDLK KNNFSGQLAK VNFSNLPNLK TLDVYFNSFT GTVLESIYSC SNLTALRVST NKLTGQLSPR
401: LIDLKYLTFL SLTTNSFINI ANALHILKSC RNLTTLLIGS NFKGELMPDD NTIDGFENLH VLDIESCKSF GGIPLWISKL RKLEVLILSE NQLSGSVPAW
501: IQTLSDLFYL DISNNNLTGE IPTTLMDMPM LKSEKNEAHL DPRVFELPIY AAPSLQYWVP MALRKVLDLS NNKLTGEIPM EIGQLKSLLS LDLSFNHLTG
601: HIPQSSCNLT NLQMLDLSNN NLTVAIPVAP NALHFLSAFN ISNNNLEGPI PSGGQFDTFQ NSSFDGNPKL CGSVLTHKCD SAEAHQAIIL SRKPTDCKVA
701: FVIAFNAFFG VGVLYDQLVL ARYFS

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.