Factsheet for TraesCS6A01G127300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G024590.1	Barley	cytosol, golgi, peroxisome	33.19	85.3
TraesCS6A01G128300.1	Wheat	cytosol	33.05	84.95
TraesCS6B01G155600.1	Wheat	vacuole	82.57	82.8
TraesCS6A01G127400.1	Wheat	extracellular, plasma membrane, vacuole	82.29	82.52
TraesCS6D01G117600.1	Wheat	cytosol, golgi, peroxisome	75.87	82.42
TraesCS6A01G128200.1	Wheat	vacuole	34.45	79.42
TraesCS6A01G128500.1	Wheat	extracellular	41.98	67.49
TraesCS7A01G452500.1	Wheat	plasma membrane	67.92	67.27
TraesCS6A01G126400.1	Wheat	plasma membrane	66.39	65.66
TraesCS6A01G128100.1	Wheat	plasma membrane	63.18	63.71
TraesCS6A01G128400.1	Wheat	plasma membrane	63.18	63.71
TraesCS6A01G127500.1	Wheat	plasma membrane	63.6	63.51
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	62.48	63.01
TraesCS6A01G130000.1	Wheat	cytosol, golgi, peroxisome	57.46	62.33
TraesCS6A01G126200.1	Wheat	plasma membrane	61.37	61.45
TraesCS4A01G273300.1	Wheat	cytosol, plasma membrane, plastid	56.21	61.25
TraesCS6A01G129900.1	Wheat	extracellular, plasma membrane	60.67	60.92
TraesCS6A01G126700.1	Wheat	cytosol, golgi, peroxisome	39.89	60.85
TraesCS6A01G130200.1	Wheat	extracellular	60.11	60.79
TraesCS6A01G129600.1	Wheat	extracellular	59.14	59.72
TraesCS6A01G129700.1	Wheat	extracellular, plasma membrane, vacuole	59.27	59.69
TraesCS7A01G408300.1	Wheat	vacuole	25.24	59.15
TraesCS6A01G128600.1	Wheat	cytosol, extracellular, golgi	12.55	57.69
TraesCS6A01G125200.1	Wheat	plasma membrane	71.13	55.25
TraesCS6A01G124700.1	Wheat	plasma membrane	70.15	47.86
TraesCS6A01G125000.1	Wheat	plasma membrane	70.43	47.73
TraesCS6A01G125400.3	Wheat	plasma membrane	67.78	47.41
Os02t0153700-01	Rice	plasma membrane	65.55	44.89
Os02t0154000-00	Rice	plasma membrane	64.85	44.46
TraesCS6A01G124800.1	Wheat	plasma membrane	64.85	44.2
TraesCS6A01G125500.1	Wheat	plasma membrane	64.16	43.52
TraesCS6A01G125300.1	Wheat	plasma membrane	63.74	43.24
TraesCS6A01G124300.1	Wheat	plasma membrane	62.9	42.95
TraesCS6A01G124500.1	Wheat	plasma membrane	62.48	42.11
TraesCS6A01G125600.1	Wheat	plasma membrane	59.41	41.44
CDX83918	Canola	mitochondrion, plasma membrane	37.1	39.0
TraesCS7A01G435300.1	Wheat	plasma membrane, plastid	57.46	38.76
AT1G17240.2	Thale cress	plasma membrane	39.61	38.69
CDX96780	Canola	mitochondrion, plasma membrane	36.68	38.56
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	36.68	38.56
TraesCS6A01G124600.1	Wheat	cytosol	39.61	38.38
TraesCS6A01G129000.1	Wheat	plasma membrane	62.48	37.18
AT1G17250.1	Thale cress	plasma membrane	37.8	35.85
CDX81812	Canola	extracellular, plasma membrane	26.36	35.13
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	26.22	34.24
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	13.53	33.68
TraesCS2A01G550700.1	Wheat	extracellular	34.17	32.93
CDY48482	Canola	plasma membrane	29.85	31.15
KRH06825	Soybean	cytosol, extracellular, nucleus	5.86	30.88
TraesCS7A01G435000.1	Wheat	plasma membrane	43.65	28.95
KRH06301	Soybean	plasma membrane	41.84	28.17
Solyc03g123780.2.1	Tomato	plasma membrane	36.4	28.16
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	41.56	27.64
KRH47735	Soybean	plasma membrane	38.21	27.62
KRH68996	Soybean	plasma membrane	37.38	27.07
Bra008027.1-P	Field mustard	plasma membrane	39.61	26.37
Bra016068.1-P	Field mustard	plasma membrane	39.75	26.22
TraesCS6A01G124900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	21.9	26.21
CDX96394	Canola	plasma membrane	39.75	26.19
PGSC0003DMT400023733	Potato	plasma membrane	39.47	26.01
CDX82157	Canola	plasma membrane	38.91	25.91
AT1G72300.1	Thale cress	plasma membrane	38.77	25.39
TraesCS2A01G550200.1	Wheat	plasma membrane	36.4	25.0
TraesCS2A01G260000.1	Wheat	plasma membrane	35.29	24.85
TraesCS6A01G222000.1	Wheat	plasma membrane	35.29	24.16
TraesCS6A01G044700.1	Wheat	plasma membrane	36.26	24.1
CDY03644	Canola	plasma membrane	28.17	23.41
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF7
SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF52075	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS6A01G127300	EnsemblPlants:TraesCS6A01G127300.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:-:100355107..100357260

Molecular Weight (calculated)

78456.4 Da

IEP (calculated)

5.604

GRAVY (calculated)

0.093

Length

717 amino acids

Sequence
(BLAST)

001: MQLLSHLCRN RLPIPFFGLA VVLLVSLASP TSSCTEQEKS SLIQLLDGFS QDGGLTVSWR SDTDCCSWEG IACSTDKTVT DVSLASHGLE GVISPFLGNL
101: TGLLHLNLSH NSLSGGLPLE LVSSSSIIVL DISFNRLRGA LHELPSSAPD RPLQVLNISS NLLTGPFPSI IWKKMDNLIA LNASNNSFTG RIPSDLCNTS
201: PSFAVLDLCF NKLSGSVPPG LGNCSMLRVL RAGYNNLSGT LPDELFNATS LECLSFPNND LHGVLDSDRI ISLRNLQILD LGWNNFNGRI PDSIGDLKRL
301: EEFHLQYNNL SGELPSTLSK CKNLIRIDLR SNYFSGELTK VNFSNLSNLK TLDLWLNNFT GVVPESIYSC SNLTALRLAA NNFHGELSLR IGNLKYLSFL
401: SLGKNNFTNI TNAFQILKSS KKLSTLLIGN NFRGELMPQD DMIDGFENLQ FLDMDGCQLS GKIPLWISRF TNLEMLILRS NQLTGPIPGW INSLSHLFYM
501: DVSNNNLTGE IPLTLMEMSM LKSTGNSSHL GPWVFELPLY IDPSLQYLAD TSFPLVLNLS NNNFTGVIPP QIGQLKVLGV LDFSFNKLSG QIPQSICNLT
601: NLQVLDLSNN NLTGDIPSAL NNLHFLSRFN ISDNDLEGLI PSGGQFSTFE VSSFDGNPKL CGSMLVHRCG SAKAPPATIL STKQLDYKVA FAIAFSAFFG
701: VGVLYDQIVL SRYLNLG

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.