Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G158400.1 | Wheat | extracellular | 37.09 | 88.25 |
| TraesCS6A01G129600.1 | Wheat | extracellular | 84.06 | 83.94 |
| TraesCS6A01G129900.1 | Wheat | extracellular, plasma membrane | 83.92 | 83.33 |
| TraesCS6A01G130000.1 | Wheat | cytosol, golgi, peroxisome | 74.89 | 80.33 |
| TraesCS6A01G129700.1 | Wheat | extracellular, plasma membrane, vacuole | 79.41 | 79.07 |
| HORVU6Hr1G024860.15 | Barley | extracellular, plasma membrane, vacuole | 90.83 | 75.59 |
| TraesCS4A01G273300.1 | Wheat | cytosol, plasma membrane, plastid | 64.03 | 69.0 |
| TraesCS6A01G128500.1 | Wheat | extracellular | 39.35 | 62.56 |
| TraesCS6A01G128600.1 | Wheat | cytosol, extracellular, golgi | 13.4 | 60.9 |
| TraesCS6A01G126900.1 | Wheat | plasma membrane, vacuole | 60.37 | 60.2 |
| TraesCS6A01G127300.1 | Wheat | extracellular, plasma membrane, vacuole | 60.79 | 60.11 |
| TraesCS6A01G126700.1 | Wheat | cytosol, golgi, peroxisome | 39.77 | 60.0 |
| TraesCS6A01G128400.1 | Wheat | plasma membrane | 59.8 | 59.63 |
| TraesCS6A01G128100.1 | Wheat | plasma membrane | 59.38 | 59.21 |
| TraesCS6A01G128200.1 | Wheat | vacuole | 25.81 | 58.84 |
| TraesCS6A01G127400.1 | Wheat | extracellular, plasma membrane, vacuole | 59.1 | 58.6 |
| TraesCS7A01G452500.1 | Wheat | plasma membrane | 59.1 | 57.87 |
| Os02t0155700-00 | Rice | plasma membrane | 49.08 | 57.52 |
| TraesCS6A01G127500.1 | Wheat | plasma membrane | 57.97 | 57.24 |
| TraesCS6A01G126400.1 | Wheat | plasma membrane | 58.53 | 57.24 |
| TraesCS6A01G126200.1 | Wheat | plasma membrane | 57.55 | 56.98 |
| EES06303 | Sorghum | plasma membrane | 58.96 | 56.87 |
| TraesCS6A01G128300.1 | Wheat | cytosol | 21.16 | 53.76 |
| TraesCS7A01G408300.1 | Wheat | vacuole | 23.13 | 53.59 |
| TraesCS6A01G125200.1 | Wheat | plasma membrane | 58.96 | 45.29 |
| TraesCS6A01G124300.1 | Wheat | plasma membrane | 61.35 | 41.43 |
| TraesCS6A01G125500.1 | Wheat | plasma membrane | 61.5 | 41.25 |
| TraesCS6A01G124500.1 | Wheat | plasma membrane | 61.5 | 40.98 |
| TraesCS6A01G124700.1 | Wheat | plasma membrane | 60.65 | 40.91 |
| TraesCS6A01G125400.3 | Wheat | plasma membrane | 58.96 | 40.78 |
| TraesCS6A01G125300.1 | Wheat | plasma membrane | 60.51 | 40.59 |
| TraesCS6A01G124800.1 | Wheat | plasma membrane | 59.94 | 40.4 |
| TraesCS6A01G125000.1 | Wheat | plasma membrane | 60.08 | 40.26 |
| TraesCS6A01G125600.1 | Wheat | plasma membrane | 56.84 | 39.2 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 36.11 | 37.54 |
| TraesCS7A01G435300.1 | Wheat | plasma membrane, plastid | 55.99 | 37.35 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 35.83 | 37.24 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 35.83 | 37.24 |
| AT1G17240.2 | Thale cress | plasma membrane | 37.8 | 36.51 |
| AT1G17250.1 | Thale cress | plasma membrane | 37.94 | 35.58 |
| TraesCS6A01G129000.1 | Wheat | plasma membrane | 59.38 | 34.94 |
| TraesCS2A01G550600.1 | Wheat | extracellular, vacuole | 26.94 | 34.79 |
| CDX81812 | Canola | extracellular, plasma membrane | 25.11 | 33.09 |
| TraesCS6A01G124600.1 | Wheat | cytosol | 34.41 | 32.97 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 12.84 | 31.6 |
| TraesCS2A01G550700.1 | Wheat | extracellular | 32.86 | 31.32 |
| TraesCS7A01G435000.1 | Wheat | plasma membrane | 44.85 | 29.42 |
| CDY48482 | Canola | plasma membrane | 28.35 | 29.26 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 5.5 | 28.68 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 42.74 | 28.11 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 35.97 | 27.51 |
| KRH06301 | Soybean | plasma membrane | 41.18 | 27.42 |
| KRH47735 | Soybean | plasma membrane | 37.8 | 27.02 |
| KRH68996 | Soybean | plasma membrane | 37.66 | 26.97 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 39.21 | 25.55 |
| Bra008027.1-P | Field mustard | plasma membrane | 38.65 | 25.44 |
| CDX82157 | Canola | plasma membrane | 38.22 | 25.16 |
| Bra016068.1-P | Field mustard | plasma membrane | 38.5 | 25.11 |
| CDX96394 | Canola | plasma membrane | 38.5 | 25.09 |
| TraesCS6A01G124900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 21.16 | 25.04 |
| AT1G72300.1 | Thale cress | plasma membrane | 38.22 | 24.75 |
| TraesCS2A01G550200.1 | Wheat | plasma membrane | 35.54 | 24.14 |
| TraesCS2A01G260000.1 | Wheat | plasma membrane | 34.13 | 23.77 |
| TraesCS6A01G044700.1 | Wheat | plasma membrane | 36.11 | 23.73 |
| CDY03644 | Canola | plasma membrane | 27.93 | 22.94 |
| TraesCS6A01G222000.1 | Wheat | plasma membrane | 33.57 | 22.73 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 |
| PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF12 | SMART:SM00369 |
| SUPFAM:SSF52058 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G130200 | EnsemblPlants:TraesCS6A01G130200.1 | SEG:seg |
Description
No Description!
Coordinates
chr6A:-:101863229..101865358
Molecular Weight (calculated)
77165.0 Da
IEP (calculated)
6.399
GRAVY (calculated)
0.086
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSFTVPPVV LQLFVLLFLA SPATACTEQE KHNLLRFLDG LSCDGGLATS WHNNGTDCCE WEGISCNGDG AVTGVSLESK GLEGPISLFL TNLTSLLRVN
101: LSHNSFSGGL PAELMFSGSI IVLDVSFNRL NGPLPELPPL ITTNRPLQVL NTSSNQFSSQ FPSATWKVMN SLIALNASNN SFSGNIPSSL CLGSPYLALL
201: DLCYNQLSGD IPNTLGDCSK LKVLKAGNKN LSGILPVETF RVTSLEYLSF PNNGLQGELD GAHIVKVSNL ATLDLGGNHF SGKIPESIAL LKRLEELHLG
301: SNNMSGELPS TLGNCTNLKT IDLKINNFSG DLGKVNFSAL QNLRSLDLMM NNFSGIIPES IYSCSNLAAL RLSANHFHGE ISPRIGNLKH LSFLSLVRNS
401: FTNITKSLHA LKSCRNISTL FIGTNFMNEA MPQDETIDGF QNLQFLSMQQ CSFTGRIPTW LSKLTSLKIL VLSNNQLTGP MPSWNNSINH LFHLDVSNNS
501: LSGEIPIALM EMAMLKSDKP AIYLDPNLPD LPIYMNPSLQ YRMGSSWPKV LNLGKNKFTG VIPQEIGHLK ALLYLNLSFN NFYGEIPQSI CNLRNLQGLD
601: LSNNHLTGAI PVALENLHFL SRFNISNNDL EGPIPAEEQL STFQASSFDG NPKLCGSVLT NHCSSVEAAP VSIIPAKQCS EKIIFAIAFG VFFGVGVLYD
701: QLVLFRYFG
101: LSHNSFSGGL PAELMFSGSI IVLDVSFNRL NGPLPELPPL ITTNRPLQVL NTSSNQFSSQ FPSATWKVMN SLIALNASNN SFSGNIPSSL CLGSPYLALL
201: DLCYNQLSGD IPNTLGDCSK LKVLKAGNKN LSGILPVETF RVTSLEYLSF PNNGLQGELD GAHIVKVSNL ATLDLGGNHF SGKIPESIAL LKRLEELHLG
301: SNNMSGELPS TLGNCTNLKT IDLKINNFSG DLGKVNFSAL QNLRSLDLMM NNFSGIIPES IYSCSNLAAL RLSANHFHGE ISPRIGNLKH LSFLSLVRNS
401: FTNITKSLHA LKSCRNISTL FIGTNFMNEA MPQDETIDGF QNLQFLSMQQ CSFTGRIPTW LSKLTSLKIL VLSNNQLTGP MPSWNNSINH LFHLDVSNNS
501: LSGEIPIALM EMAMLKSDKP AIYLDPNLPD LPIYMNPSLQ YRMGSSWPKV LNLGKNKFTG VIPQEIGHLK ALLYLNLSFN NFYGEIPQSI CNLRNLQGLD
601: LSNNHLTGAI PVALENLHFL SRFNISNNDL EGPIPAEEQL STFQASSFDG NPKLCGSVLT NHCSSVEAAP VSIIPAKQCS EKIIFAIAFG VFFGVGVLYD
701: QLVLFRYFG
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.