Factsheet for TraesCS6A01G128200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G408300.1	Wheat	vacuole	55.95	56.86
TraesCS6A01G128500.1	Wheat	extracellular	63.67	44.39
TraesCS6A01G127400.1	Wheat	extracellular, plasma membrane, vacuole	80.39	34.97
TraesCS6A01G127300.1	Wheat	extracellular, plasma membrane, vacuole	79.42	34.45
TraesCS6A01G128400.1	Wheat	plasma membrane	67.85	29.68
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	67.2	29.4
TraesCS6A01G128100.1	Wheat	plasma membrane	66.88	29.25
TraesCS6A01G126400.1	Wheat	plasma membrane	65.92	28.28
TraesCS6A01G126200.1	Wheat	plasma membrane	63.34	27.51
TraesCS6A01G127500.1	Wheat	plasma membrane	63.02	27.3
TraesCS7A01G452500.1	Wheat	plasma membrane	63.34	27.21
TraesCS6A01G129600.1	Wheat	extracellular	60.13	26.34
TraesCS6A01G129900.1	Wheat	extracellular, plasma membrane	59.81	26.05
TraesCS6A01G130200.1	Wheat	extracellular	58.84	25.81
TraesCS6A01G129700.1	Wheat	extracellular, plasma membrane, vacuole	58.52	25.56
TraesCS6A01G130000.1	Wheat	cytosol, golgi, peroxisome	52.73	24.81
TraesCS4A01G273300.1	Wheat	cytosol, plasma membrane, plastid	52.09	24.62
TraesCS6A01G125200.1	Wheat	plasma membrane	66.24	22.32
TraesCS6A01G124700.1	Wheat	plasma membrane	68.49	20.27
TraesCS6A01G124300.1	Wheat	plasma membrane	65.27	19.33
TraesCS6A01G125000.1	Wheat	plasma membrane	65.27	19.19
Os02t0153700-01	Rice	plasma membrane	64.31	19.1
TraesCS6A01G124500.1	Wheat	plasma membrane	64.63	18.89
Os02t0154000-00	Rice	plasma membrane	63.02	18.74
TraesCS6A01G125600.1	Wheat	plasma membrane	61.41	18.58
TraesCS6A01G125300.1	Wheat	plasma membrane	62.38	18.35
TraesCS6A01G124800.1	Wheat	plasma membrane	61.74	18.25
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	31.83	18.03
TraesCS6A01G125500.1	Wheat	plasma membrane	61.09	17.98
TraesCS6A01G129000.1	Wheat	plasma membrane	68.81	17.76
TraesCS6A01G125400.3	Wheat	plasma membrane	58.52	17.76
TraesCS7A01G435300.1	Wheat	plasma membrane, plastid	57.56	16.84
AT1G17240.2	Thale cress	plasma membrane	38.26	16.21
CDY48482	Canola	plasma membrane	33.76	15.28
AT1G17250.1	Thale cress	plasma membrane	35.69	14.68
CDX83918	Canola	mitochondrion, plasma membrane	31.83	14.52
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	31.19	14.22
CDX96780	Canola	mitochondrion, plasma membrane	31.19	14.22
TraesCS2A01G550700.1	Wheat	extracellular	31.51	13.17
TraesCS7A01G435000.1	Wheat	plasma membrane	44.69	12.86
Solyc03g123780.2.1	Tomato	plasma membrane	35.37	11.87
KRH68996	Soybean	plasma membrane	36.98	11.62
KRH06301	Soybean	plasma membrane	38.59	11.27
Bra008027.1-P	Field mustard	plasma membrane	37.62	10.86
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	37.3	10.76
CDX82157	Canola	plasma membrane	36.98	10.68
Bra016068.1-P	Field mustard	plasma membrane	36.98	10.58
CDX96394	Canola	plasma membrane	36.98	10.57
AT1G72300.1	Thale cress	plasma membrane	36.98	10.5
PGSC0003DMT400023733	Potato	plasma membrane	35.37	10.11
TraesCS2A01G550200.1	Wheat	plasma membrane	33.76	10.06
TraesCS6A01G044700.1	Wheat	plasma membrane	33.44	9.64
KRH47735	Soybean	plasma membrane	30.55	9.58
TraesCS6A01G222000.1	Wheat	plasma membrane	29.9	8.88
TraesCS2A01G260000.1	Wheat	plasma membrane	28.94	8.84
CDX81812	Canola	extracellular, plasma membrane	15.11	8.74
TraesCS6A01G126700.1	Wheat	cytosol, golgi, peroxisome	12.22	8.09
CDY03644	Canola	plasma membrane	21.54	7.76
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	0.32	0.35
TraesCS6A01G124600.1	Wheat	cytosol	0.32	0.14
TraesCS6A01G128600.1	Wheat	cytosol, extracellular, golgi	0.0	0.0
TraesCS6A01G128300.1	Wheat	cytosol	0.0	0.0
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0
HORVU6Hr1G024590.1	Barley	cytosol, golgi, peroxisome	0.0	0.0
KRH06825	Soybean	cytosol, extracellular, nucleus	0.0	0.0
TraesCS6A01G124900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6A01G128200.1	EnsemblPlantsGene:TraesCS6A01G128200	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43932
PANTHER:PTHR43932:SF1	PFAM:PF00560	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:100743178..100744113

Molecular Weight (calculated)

33383.2 Da

IEP (calculated)

8.401

GRAVY (calculated)

0.105

Length

311 amino acids

Sequence
(BLAST)

001: MQLPSHSHKN RFLIPFFGLT VVLLVSLAPP TSSCTEQEKS SLIKFLSGLW KDGGLTVSWR SDTDCCSWEG ITCSLNRAVT DVSLASQGLE GSISPFLGNL
101: TSLLRLNLSR NSLSGGLPLE LVSSSSIIVL DVSFNRLTGG LHKLPSSTPA RPLQVLNISS NLLTGPFPST IWKTMNNLIA LNASNNRFTG AIPTYFCNGS
201: PSLVVLELSF NKLSGSIPPG LGGCSMLTVL RGGYNNLSGT LPDELSNATS LECLSFPNNY LQGVLDSACI FSLRNLRTID LGGNYFNGRI PDSVGQLKRL
301: EKFQLGHNNL S

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.