Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G117400.1 | Wheat | plasma membrane, vacuole | 94.94 | 94.94 |
| TraesCS6B01G155300.1 | Wheat | cytosol, golgi, plasma membrane | 52.88 | 93.07 |
| TraesCS6B01G155400.1 | Wheat | extracellular | 28.55 | 89.82 |
| TraesCS6A01G128500.1 | Wheat | extracellular | 51.34 | 81.84 |
| TraesCS6A01G128100.1 | Wheat | plasma membrane | 78.06 | 78.06 |
| TraesCS6A01G128400.1 | Wheat | plasma membrane | 76.23 | 76.23 |
| TraesCS6A01G126700.1 | Wheat | cytosol, golgi, peroxisome | 49.65 | 75.11 |
| HORVU6Hr1G024660.4 | Barley | extracellular, plasma membrane | 74.4 | 74.4 |
| TraesCS6A01G128600.1 | Wheat | cytosol, extracellular, golgi | 15.89 | 72.44 |
| TraesCS6A01G128200.1 | Wheat | vacuole | 29.4 | 67.2 |
| Os02t0156400-01 | Rice | cytosol, mitochondrion, plasma membrane, vacuole | 65.12 | 64.48 |
| TraesCS6A01G127300.1 | Wheat | extracellular, plasma membrane, vacuole | 63.01 | 62.48 |
| EES06299 | Sorghum | plasma membrane | 62.45 | 62.36 |
| TraesCS6A01G127400.1 | Wheat | extracellular, plasma membrane, vacuole | 62.31 | 61.96 |
| OQU84820 | Sorghum | extracellular, plastid, vacuole | 29.54 | 61.95 |
| TraesCS6A01G130200.1 | Wheat | extracellular | 60.2 | 60.37 |
| TraesCS6A01G129900.1 | Wheat | extracellular, plasma membrane | 60.34 | 60.08 |
| TraesCS6A01G127500.1 | Wheat | plasma membrane | 60.62 | 60.03 |
| TraesCS6A01G130000.1 | Wheat | cytosol, golgi, peroxisome | 55.56 | 59.76 |
| TraesCS6A01G126200.1 | Wheat | plasma membrane | 59.21 | 58.8 |
| TraesCS6A01G129600.1 | Wheat | extracellular | 58.65 | 58.73 |
| TraesCS6A01G126400.1 | Wheat | plasma membrane | 59.63 | 58.48 |
| TraesCS6A01G129700.1 | Wheat | extracellular, plasma membrane, vacuole | 58.37 | 58.29 |
| TraesCS7A01G452500.1 | Wheat | plasma membrane | 58.93 | 57.87 |
| TraesCS7A01G408300.1 | Wheat | vacuole | 24.75 | 57.52 |
| TraesCS4A01G273300.1 | Wheat | cytosol, plasma membrane, plastid | 53.02 | 57.29 |
| TraesCS6A01G128300.1 | Wheat | cytosol | 20.82 | 53.05 |
| Zm00001d005908_P001 | Maize | plastid | 30.1 | 49.65 |
| TraesCS6A01G124300.1 | Wheat | plasma membrane | 73.28 | 49.62 |
| TraesCS6A01G125200.1 | Wheat | plasma membrane | 59.49 | 45.83 |
| Os02t0153200-01 | Rice | plasma membrane | 66.95 | 45.33 |
| TraesCS6A01G129000.1 | Wheat | plasma membrane | 76.79 | 45.31 |
| Os02t0153100-00 | Rice | plasma membrane | 66.67 | 45.1 |
| TraesCS6A01G124500.1 | Wheat | plasma membrane | 63.99 | 42.76 |
| TraesCS6A01G125500.1 | Wheat | plasma membrane | 62.73 | 42.19 |
| TraesCS6A01G125400.3 | Wheat | plasma membrane | 60.62 | 42.05 |
| TraesCS6A01G124700.1 | Wheat | plasma membrane | 61.88 | 41.86 |
| TraesCS6A01G124800.1 | Wheat | plasma membrane | 61.04 | 41.25 |
| TraesCS6A01G125300.1 | Wheat | plasma membrane | 61.32 | 41.25 |
| TraesCS6A01G125600.1 | Wheat | plasma membrane | 59.35 | 41.05 |
| TraesCS6A01G125000.1 | Wheat | plasma membrane | 60.06 | 40.36 |
| TraesCS7A01G435300.1 | Wheat | plasma membrane, plastid | 56.12 | 37.54 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 35.87 | 37.39 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 35.87 | 37.39 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 35.87 | 37.39 |
| AT1G17240.2 | Thale cress | plasma membrane | 37.97 | 36.78 |
| AT1G17250.1 | Thale cress | plasma membrane | 37.55 | 35.32 |
| TraesCS2A01G550600.1 | Wheat | extracellular, vacuole | 25.88 | 33.52 |
| CDX81812 | Canola | extracellular, plasma membrane | 25.04 | 33.09 |
| TraesCS6A01G124600.1 | Wheat | cytosol | 33.76 | 32.43 |
| TraesCS2A01G550700.1 | Wheat | extracellular | 32.35 | 30.91 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 12.24 | 30.21 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 5.77 | 30.15 |
| CDY48482 | Canola | plasma membrane | 28.41 | 29.4 |
| TraesCS7A01G435000.1 | Wheat | plasma membrane | 43.18 | 28.4 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 35.44 | 27.18 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 40.79 | 26.9 |
| KRH06301 | Soybean | plasma membrane | 40.08 | 26.76 |
| KRH47735 | Soybean | plasma membrane | 37.27 | 26.71 |
| KRH68996 | Soybean | plasma membrane | 36.57 | 26.26 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 39.1 | 25.55 |
| Bra016068.1-P | Field mustard | plasma membrane | 38.4 | 25.11 |
| CDX96394 | Canola | plasma membrane | 38.4 | 25.09 |
| Bra008027.1-P | Field mustard | plasma membrane | 37.69 | 24.88 |
| CDX82157 | Canola | plasma membrane | 37.41 | 24.7 |
| TraesCS2A01G550200.1 | Wheat | plasma membrane | 35.87 | 24.43 |
| TraesCS2A01G260000.1 | Wheat | plasma membrane | 34.74 | 24.26 |
| AT1G72300.1 | Thale cress | plasma membrane | 36.99 | 24.02 |
| TraesCS6A01G044700.1 | Wheat | plasma membrane | 35.72 | 23.54 |
| TraesCS6A01G124900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 19.69 | 23.37 |
| TraesCS6A01G222000.1 | Wheat | plasma membrane | 34.18 | 23.21 |
| CDY03644 | Canola | plasma membrane | 27.71 | 22.83 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 |
| PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF1 | SMART:SM00369 |
| SUPFAM:SSF52047 | SUPFAM:SSF52058 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G126900 | EnsemblPlants:TraesCS6A01G126900.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:100226767..100229130
Molecular Weight (calculated)
77147.9 Da
IEP (calculated)
6.021
GRAVY (calculated)
0.133
Length
711 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPLSHSHRN GFPVPFFGLA LVLLVCLDSP TSSCTDQEKS SLLQLLTGLS SDGGLTASWQ IDTDCCTWEG ITCNQDRRVT DVSLASRGLK GSISPFLGNL
101: TGLLRLNLSQ NSLSDGLPLE LVSSSSILVL DVSFNCLTGG LSELPSSTPT RPLQVLNISS NFFTGRFPST TWEVMKSLVV LNASTNSFTG QIPTTPCVSA
201: PSFAVLELSF NQLSGNIPPG LGNCLALKFL CAGYNNLNGT LPDELFKVRS LQYISLPNNR LQGALNGIIK LTNLVTLDLG KNELSGNIPD SIGELKRLEE
301: IHLGHNNMSG ELPSAHSNCT NLITVDLKAN QFSGELTKVN FVSLSKLRKL DLVFNNFTGT IPESIYSCSK LTALRLSYNH FHGQLSEKIG NLKSLRFLSL
401: VNLSLTNITR TLKILESSRS LTTLFIGFNF LHETMPEDGI IDGFENLQVL SMSYCSMSGT IPDWLSNLTN LGMLFLQGNQ LTGPIPDWIS TLNFLFHLDI
501: SNNSFTGEIS TALAEMPMLK SDKIAAKAFF ELPVYVFSPF IQYINAGACP KVLNLAVNKF TGVIPGEMGQ LRALVSLNLS YNKLSGEIPE PICTLTNLQM
601: LDLSSNHLTG TIPAALNNLH FLSKFNISNN DFEGHIPTAG QLSTFPDSSF DGNPKLCGPM IANHCDSAEA GPEFINTGKE IGRKVTFAIA FGAFFAVGVL
701: YDQMVLARYF G
101: TGLLRLNLSQ NSLSDGLPLE LVSSSSILVL DVSFNCLTGG LSELPSSTPT RPLQVLNISS NFFTGRFPST TWEVMKSLVV LNASTNSFTG QIPTTPCVSA
201: PSFAVLELSF NQLSGNIPPG LGNCLALKFL CAGYNNLNGT LPDELFKVRS LQYISLPNNR LQGALNGIIK LTNLVTLDLG KNELSGNIPD SIGELKRLEE
301: IHLGHNNMSG ELPSAHSNCT NLITVDLKAN QFSGELTKVN FVSLSKLRKL DLVFNNFTGT IPESIYSCSK LTALRLSYNH FHGQLSEKIG NLKSLRFLSL
401: VNLSLTNITR TLKILESSRS LTTLFIGFNF LHETMPEDGI IDGFENLQVL SMSYCSMSGT IPDWLSNLTN LGMLFLQGNQ LTGPIPDWIS TLNFLFHLDI
501: SNNSFTGEIS TALAEMPMLK SDKIAAKAFF ELPVYVFSPF IQYINAGACP KVLNLAVNKF TGVIPGEMGQ LRALVSLNLS YNKLSGEIPE PICTLTNLQM
601: LDLSSNHLTG TIPAALNNLH FLSKFNISNN DFEGHIPTAG QLSTFPDSSF DGNPKLCGPM IANHCDSAEA GPEFINTGKE IGRKVTFAIA FGAFFAVGVL
701: YDQMVLARYF G
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.