Factsheet for TraesCS6A01G128100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G156800.2	Wheat	endoplasmic reticulum, plasma membrane	73.42	93.55
TraesCS6A01G128500.1	Wheat	extracellular	49.09	78.25
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	78.06	78.06
TraesCS6A01G128400.1	Wheat	plasma membrane	77.64	77.64
TraesCS6A01G126700.1	Wheat	cytosol, golgi, peroxisome	49.23	74.47
TraesCS6A01G128600.1	Wheat	cytosol, extracellular, golgi	16.17	73.72
HORVU6Hr1G024660.4	Barley	extracellular, plasma membrane	73.7	73.7
TraesCS6A01G128200.1	Wheat	vacuole	29.25	66.88
Os02t0156400-01	Rice	cytosol, mitochondrion, plasma membrane, vacuole	65.26	64.62
EES06299	Sorghum	plasma membrane	64.7	64.61
TraesCS6A01G127300.1	Wheat	extracellular, plasma membrane, vacuole	63.71	63.18
TraesCS6A01G127400.1	Wheat	extracellular, plasma membrane, vacuole	63.15	62.8
OQU84820	Sorghum	extracellular, plastid, vacuole	29.11	61.06
TraesCS6A01G129900.1	Wheat	extracellular, plasma membrane	60.76	60.5
TraesCS6A01G127500.1	Wheat	plasma membrane	60.06	59.47
TraesCS6A01G130200.1	Wheat	extracellular	59.21	59.38
TraesCS6A01G129600.1	Wheat	extracellular	58.93	59.01
TraesCS6A01G130000.1	Wheat	cytosol, golgi, peroxisome	54.71	58.85
TraesCS7A01G452500.1	Wheat	plasma membrane	59.35	58.29
TraesCS6A01G126400.1	Wheat	plasma membrane	59.35	58.21
TraesCS6A01G129700.1	Wheat	extracellular, plasma membrane, vacuole	58.23	58.15
TraesCS4A01G273300.1	Wheat	cytosol, plasma membrane, plastid	53.45	57.75
TraesCS6A01G126200.1	Wheat	plasma membrane	57.95	57.54
TraesCS6A01G128300.1	Wheat	cytosol	21.52	54.84
TraesCS7A01G408300.1	Wheat	vacuole	23.49	54.58
Zm00001d005908_P001	Maize	plastid	31.5	51.97
TraesCS6A01G124300.1	Wheat	plasma membrane	73.42	49.71
Os02t0153100-00	Rice	plasma membrane	67.79	45.86
TraesCS6A01G125200.1	Wheat	plasma membrane	59.21	45.61
Os02t0153200-01	Rice	plasma membrane	67.23	45.52
TraesCS6A01G129000.1	Wheat	plasma membrane	73.98	43.65
TraesCS6A01G124700.1	Wheat	plasma membrane	62.87	42.53
TraesCS6A01G125500.1	Wheat	plasma membrane	62.87	42.29
TraesCS6A01G124500.1	Wheat	plasma membrane	63.15	42.2
TraesCS6A01G125400.3	Wheat	plasma membrane	59.77	41.46
TraesCS6A01G125600.1	Wheat	plasma membrane	59.77	41.34
TraesCS6A01G125300.1	Wheat	plasma membrane	60.9	40.97
TraesCS6A01G124800.1	Wheat	plasma membrane	60.34	40.78
TraesCS6A01G125000.1	Wheat	plasma membrane	59.92	40.26
CDX83918	Canola	mitochondrion, plasma membrane	36.01	37.54
CDX96780	Canola	mitochondrion, plasma membrane	35.58	37.1
TraesCS7A01G435300.1	Wheat	plasma membrane, plastid	55.41	37.06
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	35.44	36.95
AT1G17240.2	Thale cress	plasma membrane	37.55	36.38
AT1G17250.1	Thale cress	plasma membrane	36.85	34.66
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	26.3	34.06
TraesCS6A01G124600.1	Wheat	cytosol	33.9	32.57
KRH06825	Soybean	cytosol, extracellular, nucleus	6.19	32.35
CDX81812	Canola	extracellular, plasma membrane	24.47	32.34
TraesCS2A01G550700.1	Wheat	extracellular	32.77	31.32
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.52	30.9
CDY48482	Canola	plasma membrane	28.55	29.55
TraesCS7A01G435000.1	Wheat	plasma membrane	43.6	28.68
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	41.49	27.37
KRH06301	Soybean	plasma membrane	40.93	27.32
KRH47735	Soybean	plasma membrane	37.97	27.22
Solyc03g123780.2.1	Tomato	plasma membrane	35.44	27.18
KRH68996	Soybean	plasma membrane	36.99	26.57
PGSC0003DMT400023733	Potato	plasma membrane	39.1	25.55
Bra008027.1-P	Field mustard	plasma membrane	38.26	25.26
CDX82157	Canola	plasma membrane	37.97	25.07
Bra016068.1-P	Field mustard	plasma membrane	38.26	25.02
CDX96394	Canola	plasma membrane	38.26	25.0
AT1G72300.1	Thale cress	plasma membrane	38.26	24.84
TraesCS2A01G260000.1	Wheat	plasma membrane	35.16	24.56
TraesCS2A01G550200.1	Wheat	plasma membrane	35.87	24.43
TraesCS6A01G044700.1	Wheat	plasma membrane	36.71	24.19
TraesCS6A01G124900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	19.97	23.71
TraesCS6A01G222000.1	Wheat	plasma membrane	34.18	23.21
CDY03644	Canola	plasma membrane	27.71	22.83
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6A01G128100.1	EnsemblPlantsGene:TraesCS6A01G128100	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR43932	PANTHER:PTHR43932:SF1	PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM
SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr6A:+:100738230..100740365

Molecular Weight (calculated)

77594.0 Da

IEP (calculated)

5.817

GRAVY (calculated)

0.185

Length

711 amino acids

Sequence
(BLAST)

001: MKSLNRSQRS RFPIPFFGLA LVLLVFLASP TRSCTEQEKS SLLQLLAGLS QDGGLTASWR SNTDCCRWEG ISCSLNRMVT DVVLAYRGLE GSISPFLGNL
101: TSLLRFDLSH NLLSGGLPLE LLQSSSILVL DVSFNRLTGG LSELPSSTPV RPLQVLNISS NLFTGRFPST IWEVMKSLVA LNASTNSFTG QMPTMSCVSA
201: PSFAVLELSF NKFSGNIPPG LSNCSLLKLL SAGNNHLSGT LPDELFKVTT LEHLSLPFNW LEGELKGIIN LTNLVTLDLG KNEFRGNIPE SIGELKKLEE
301: LLLDHNSMSG ELPSALSNCT NLVTLDLKVN HFNGEFTKIN FLSLPNLKIL DILSNDFTGT IPESIYSCSK LTALRLSFNH FHGQLSEKIG NLKSLSFLAL
401: VNLSLTNITR TLQILGSSRS LTTIFIGFNF LHETMPEDDN IGGFENLQVL SMNYCSLSGT LPGWLSKLTK LGMLFLQSNQ LTGPIPDWIS SLKLLFYLDL
501: SNNSFTGEIP TALMEMPMLK SDKTAPKIFS ELPLYFFSPF VEYLKPGAFP KVLNLGINNF TGVIPEEIGQ LQGLLLLNLS SNKLSGEIPQ QIGTLTNLQL
601: LDLSSNHFTS TIPATLNNLH FLSKFNISNN DLEGSIPTAG QLSTFPDSSF DGNPKLCGLM IVNHCGSAEA ASESIISREQ IGSKVIFAIA FGAFFGVGVL
701: YDQMVLARYF G

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.