Factsheet for TraesCS6A01G126200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G154400.1	Wheat	plastid	35.89	93.8
TraesCS6D01G116600.1	Wheat	plastid	73.88	91.84
TraesCS6A01G128500.1	Wheat	extracellular	40.92	65.7
TraesCS6A01G126400.1	Wheat	plasma membrane	64.53	63.72
TraesCS6A01G128200.1	Wheat	vacuole	27.51	63.34
TraesCS6A01G127500.1	Wheat	plasma membrane	61.87	61.7
TraesCS6A01G127400.1	Wheat	extracellular, plasma membrane, vacuole	61.59	61.68
TraesCS6A01G127300.1	Wheat	extracellular, plasma membrane, vacuole	61.45	61.37
TraesCS6A01G128400.1	Wheat	plasma membrane	59.22	59.63
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	58.8	59.21
TraesCS6A01G130000.1	Wheat	cytosol, golgi, peroxisome	54.05	58.55
OQU84395	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	58.38	58.14
TraesCS4A01G273300.1	Wheat	cytosol, plasma membrane, plastid	53.35	58.05
TraesCS6A01G128100.1	Wheat	plasma membrane	57.54	57.95
OQU84402	Sorghum	endoplasmic reticulum, vacuole	41.34	57.93
TraesCS6A01G129900.1	Wheat	extracellular, plasma membrane	57.68	57.84
TraesCS7A01G452500.1	Wheat	plasma membrane	58.38	57.73
TraesCS6A01G130200.1	Wheat	extracellular	56.98	57.55
TraesCS6A01G129700.1	Wheat	extracellular, plasma membrane, vacuole	56.7	57.02
TraesCS6A01G129600.1	Wheat	extracellular	56.15	56.62
TraesCS6A01G126700.1	Wheat	cytosol, golgi, peroxisome	37.15	56.6
KXG29504	Sorghum	plasma membrane	47.07	56.07
TraesCS7A01G408300.1	Wheat	vacuole	23.88	55.88
TraesCS6A01G128300.1	Wheat	cytosol	21.51	55.2
TraesCS6A01G125200.1	Wheat	plasma membrane	62.43	48.43
TraesCS6A01G124500.1	Wheat	plasma membrane	69.83	46.99
TraesCS6A01G125300.1	Wheat	plasma membrane	67.32	45.6
TraesCS6A01G128600.1	Wheat	cytosol, extracellular, golgi	9.92	45.51
TraesCS6A01G124700.1	Wheat	plasma membrane	65.92	44.91
TraesCS6A01G124800.1	Wheat	plasma membrane	65.92	44.87
TraesCS6A01G125500.1	Wheat	plasma membrane	66.06	44.75
KXG29501	Sorghum	plasma membrane	65.08	44.05
Os02t0153400-00	Rice	plasma membrane	64.53	43.46
TraesCS6A01G124300.1	Wheat	plasma membrane	63.27	43.14
TraesCS6A01G125000.1	Wheat	plasma membrane	63.55	43.01
TraesCS6A01G125400.3	Wheat	plasma membrane	61.45	42.93
TraesCS6A01G125600.1	Wheat	plasma membrane	61.59	42.9
TraesCS7A01G435300.1	Wheat	plasma membrane, plastid	58.38	39.32
CDX83918	Canola	mitochondrion, plasma membrane	37.43	39.3
CDX96780	Canola	mitochondrion, plasma membrane	37.29	39.15
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	37.15	39.0
AT1G17240.2	Thale cress	plasma membrane	38.55	37.6
TraesCS6A01G124600.1	Wheat	cytosol	38.69	37.43
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	27.37	35.7
AT1G17250.1	Thale cress	plasma membrane	37.43	35.45
TraesCS6A01G129000.1	Wheat	plasma membrane	58.94	35.02
CDX81812	Canola	extracellular, plasma membrane	25.0	33.27
KRH06825	Soybean	cytosol, extracellular, nucleus	6.28	33.09
TraesCS2A01G550700.1	Wheat	extracellular	34.08	32.8
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.99	32.29
CDY48482	Canola	plasma membrane	28.91	30.13
Zm00001d015298_P001	Maize	cytosol, plasma membrane, plastid	26.82	29.68
TraesCS7A01G435000.1	Wheat	plasma membrane	44.55	29.51
TraesCS6A01G124900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	24.58	29.38
Solyc03g123780.2.1	Tomato	plasma membrane	37.29	28.8
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	43.16	28.66
KRH06301	Soybean	plasma membrane	42.46	28.54
KRH47735	Soybean	plasma membrane	38.41	27.72
KRH68996	Soybean	plasma membrane	37.99	27.47
PGSC0003DMT400023733	Potato	plasma membrane	40.64	26.75
Bra008027.1-P	Field mustard	plasma membrane	40.08	26.65
CDX82157	Canola	plasma membrane	39.8	26.46
TraesCS2A01G260000.1	Wheat	plasma membrane	37.29	26.23
Bra016068.1-P	Field mustard	plasma membrane	39.53	26.04
CDX96394	Canola	plasma membrane	39.53	26.01
AT1G72300.1	Thale cress	plasma membrane	39.25	25.66
TraesCS2A01G550200.1	Wheat	plasma membrane	37.15	25.48
TraesCS6A01G044700.1	Wheat	plasma membrane	37.85	25.12
TraesCS6A01G222000.1	Wheat	plasma membrane	36.31	24.83
CDY03644	Canola	plasma membrane	28.77	23.87
CDY72222	Canola	cytosol, nucleus, plastid	0.28	1.96

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00560	PFAM:PF08263	PFAM:PF12799	PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019
PANTHER:PTHR43932	PANTHER:PTHR43932:SF12	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS6A01G126200	EnsemblPlants:TraesCS6A01G126200.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:-:99784767..99786917

Molecular Weight (calculated)

77665.6 Da

IEP (calculated)

5.353

GRAVY (calculated)

0.082

Length

716 amino acids

Sequence
(BLAST)

001: MQPLHFPYME YSRKLTFFAL VLLISLASPI SSCTEKEKGS LLQFLSGLSS DGGLTASWKQ NGADCCEWEG VTCGEDGAVT GVSLALKGLE GRITPSLGNL
101: VGLLRLNLSH NSLSGGLPLE LVSSGSIIVL DVSFNRLGGD MQELPSSTPS RPLQVLNISS NLFTGRFPSS TTWEVMDNLV VLNASNNSFT GQIPDNFCSS
201: SSLLAVVELC YNQFTGVIPP GLGNCSMLRV LKAGHNNLRG TLPNELFDAS LLEYLSLPSN VLDGVLDGAQ IIKLSNLVTL DLGRNNFSGK IPDSIGELES
301: LEELHLDYNN MSGELPSALS NCTNLITINF KSNNLSGELS KVNFSTLPRL KTLDILYNNF NGRVPESLYT CSNLTALRLS GNNLHGQLSP RIGDLKHLTF
401: LSLAMNSFTN ITNALHILQR CTNLTTLLMG SSFRGELMPE DGFIDGFENL QVLSLNDCSL LGKIPLWISK LAKLEMLILS GNQLTGSTPA WIEGLKHLFY
501: LDISNNSLTG EIPRSLMDMQ MLQSEKTKAR LDPRIFELPV YRGPSLQYRI PIAFAKVLDL SNNKLTGEIP SEIGQLKSLV SLNLSFNALT GQIPISVCNL
601: TNLQVLDFSS NNLIGAIPDA LNRLNFLSAF NISYNDLEGP IPSGGQFNTF QNSSFDGNPK LCGSMLTHKC GPASTRPPTA MATKQTDYKA AFAIAFSAFF
701: GVGVLYDQLV LSRFFG

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.