Factsheet for TraesCS6A01G129900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G157800.1	Wheat	cytosol	55.46	97.06
TraesCS6A01G130200.1	Wheat	extracellular	83.33	83.92
TraesCS6A01G129600.1	Wheat	extracellular	80.95	81.41
TraesCS6A01G129700.1	Wheat	extracellular, plasma membrane, vacuole	79.41	79.63
TraesCS6A01G130000.1	Wheat	cytosol, golgi, peroxisome	72.97	78.82
TraesCS4A01G273300.1	Wheat	cytosol, plasma membrane, plastid	64.15	69.6
TraesCS6A01G128600.1	Wheat	cytosol, extracellular, golgi	14.15	64.74
TraesCS6A01G128500.1	Wheat	extracellular	39.5	63.23
TraesCS6A01G128100.1	Wheat	plasma membrane	60.5	60.76
TraesCS6A01G127300.1	Wheat	extracellular, plasma membrane, vacuole	60.92	60.67
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	60.08	60.34
TraesCS6A01G128400.1	Wheat	plasma membrane	59.66	59.92
TraesCS6A01G128200.1	Wheat	vacuole	26.05	59.81
TraesCS6A01G126700.1	Wheat	cytosol, golgi, peroxisome	39.36	59.79
TraesCS6A01G127400.1	Wheat	extracellular, plasma membrane, vacuole	59.24	59.16
EES06303	Sorghum	plasma membrane	59.52	57.82
TraesCS6A01G126200.1	Wheat	plasma membrane	57.84	57.68
TraesCS7A01G408300.1	Wheat	vacuole	24.65	57.52
TraesCS6A01G126400.1	Wheat	plasma membrane	58.26	57.38
TraesCS7A01G452500.1	Wheat	plasma membrane	57.84	57.04
TraesCS6A01G127500.1	Wheat	plasma membrane	57.0	56.69
Os02t0155700-00	Rice	plasma membrane	47.62	56.2
TraesCS6A01G128300.1	Wheat	cytosol	21.71	55.56
TraesCS6A01G125200.1	Wheat	plasma membrane	58.54	45.29
TraesCS6A01G124300.1	Wheat	plasma membrane	61.76	42.0
TraesCS6A01G125400.3	Wheat	plasma membrane	59.52	41.46
TraesCS6A01G125300.1	Wheat	plasma membrane	60.5	40.87
TraesCS6A01G124700.1	Wheat	plasma membrane	60.08	40.82
TraesCS6A01G125500.1	Wheat	plasma membrane	60.36	40.78
TraesCS6A01G124500.1	Wheat	plasma membrane	60.64	40.7
TraesCS6A01G125000.1	Wheat	plasma membrane	60.22	40.64
TraesCS6A01G124800.1	Wheat	plasma membrane	58.96	40.02
TraesCS6A01G125600.1	Wheat	plasma membrane	56.3	39.11
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	36.69	38.42
CDX83918	Canola	mitochondrion, plasma membrane	36.55	38.27
CDX96780	Canola	mitochondrion, plasma membrane	36.41	38.12
TraesCS7A01G435300.1	Wheat	plasma membrane, plastid	55.88	37.54
AT1G17240.2	Thale cress	plasma membrane	37.82	36.78
AT1G17250.1	Thale cress	plasma membrane	37.96	35.85
TraesCS6A01G129000.1	Wheat	plasma membrane	60.08	35.6
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	27.17	35.34
CDX81812	Canola	extracellular, plasma membrane	24.93	33.09
TraesCS6A01G124600.1	Wheat	cytosol	33.75	32.57
TraesCS2A01G550700.1	Wheat	extracellular	33.33	31.99
KRH06825	Soybean	cytosol, extracellular, nucleus	6.02	31.62
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.61	31.25
CDY48482	Canola	plasma membrane	28.99	30.13
TraesCS7A01G435000.1	Wheat	plasma membrane	44.68	29.51
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	43.84	29.04
KRH06301	Soybean	plasma membrane	43.14	28.92
Solyc03g123780.2.1	Tomato	plasma membrane	37.25	28.69
KRH68996	Soybean	plasma membrane	39.08	28.18
KRH47735	Soybean	plasma membrane	38.8	27.92
PGSC0003DMT400023733	Potato	plasma membrane	40.48	26.56
Bra008027.1-P	Field mustard	plasma membrane	39.64	26.28
CDX82157	Canola	plasma membrane	39.22	26.0
Bra016068.1-P	Field mustard	plasma membrane	38.8	25.48
CDX96394	Canola	plasma membrane	38.8	25.46
AT1G72300.1	Thale cress	plasma membrane	38.94	25.39
TraesCS2A01G260000.1	Wheat	plasma membrane	34.87	24.46
TraesCS6A01G044700.1	Wheat	plasma membrane	36.83	24.37
TraesCS6A01G124900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	20.45	24.37
TraesCS2A01G550200.1	Wheat	plasma membrane	35.43	24.23
TraesCS6A01G222000.1	Wheat	plasma membrane	34.59	23.59
CDY03644	Canola	plasma membrane	28.43	23.52
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF12
SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G129900	EnsemblPlants:TraesCS6A01G129900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:101560494..101562638

Molecular Weight (calculated)

77268.3 Da

IEP (calculated)

6.501

GRAVY (calculated)

0.125

Length

714 amino acids

Sequence
(BLAST)

001: MCSFTVPPAV LQLFLLLFLA SPATACTEQE KRNLLQFLAG LSSDGGLATS WCNNGADCCE WEGISCNGDG AVTGVSLESK GLEGPISPFL TNLTSLLHIN
101: LSHNSLSGGL PAELMFSRSI IVLDVSFSRL NGPLPELPSL VTTDRPLQVL NISSNQFGSE FPSATWKVMK NLIALNTSNN SFSGHIPSSL CVSSPSLALL
201: DLSYNQLSGD IPNTLGNCSK LKVLKAGNNH LSGILPVEIF HATSLEYLSF PNNGGLQGEL DGAHIVKLSS LLILDLGGNS FSGAIPESIG QLRRLEELHL
301: GSNNMSGELP STMSNCTNLK TIDLKINNLT GDLGKVNFAT LQNLKSLDLM ENNLGGIVPE SIYSCSNLTA LRLSANHFHG EISSRIGNLK HLSFLSISRN
401: SFTNITKALH ALKSCRNIST LLIGRNFMNE AMPQDESIDG FQNLQFLAMH QCSLTGRIPT WLSKLTRLKV LVLSKNQLTG PMPSWINSLN NLFHLDVSNN
501: SLSGKIPVTL MEMAMLKLDK PAIYLDPSLV DLDLLIYAVD ASKLQYRINS DWCKVLNLGN NKFTGVIPQE IGQLKALLYL NLSSNNFYGE IPQSIGNLTN
601: LQRLDLSNNH LTGEIPAALE ILHFLSEFNI SNNDLEGPIP TTGQLSTFQA SSFNGNPKLC GPMLINHCSS VEAAPISIVS AKKCSSKVIF VTAFGVFFGV
701: GVLYDQLVLF RYFG

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.