Factsheet for TraesCS6A01G125600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G116000.1	Wheat	plasma membrane	71.69	84.52
TraesCS6A01G125500.1	Wheat	plasma membrane	84.63	82.31
TraesCS6A01G125300.1	Wheat	plasma membrane	84.34	82.02
TraesCS6A01G124600.1	Wheat	cytosol	51.65	71.76
TraesCS6A01G124900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	41.73	71.62
TraesCS6A01G125400.3	Wheat	plasma membrane	70.72	70.93
TraesCS6A01G124800.1	Wheat	plasma membrane	72.08	70.44
TraesCS6A01G125000.1	Wheat	plasma membrane	71.01	69.0
TraesCS6A01G124700.1	Wheat	plasma membrane	70.53	68.98
Os02t0153500-00	Rice	plasma membrane	69.75	68.35
EES06297	Sorghum	plasma membrane	69.94	68.09
Os02t0154200-01	Rice	plasma membrane	68.77	67.4
TraesCS6A01G128500.1	Wheat	extracellular	29.18	67.26
OQU84392	Sorghum	plasma membrane	66.93	66.6
TraesCS6A01G124300.1	Wheat	plasma membrane	67.12	65.71
TraesCS6A01G127500.1	Wheat	plasma membrane	45.82	65.6
TraesCS6A01G125200.1	Wheat	plasma membrane	58.27	64.9
TraesCS6A01G124500.1	Wheat	plasma membrane	67.12	64.85
Zm00001d053867_P001	Maize	plasma membrane	65.95	62.32
TraesCS6A01G126200.1	Wheat	plasma membrane	42.9	61.59
TraesCS6A01G128200.1	Wheat	vacuole	18.58	61.41
TraesCS6A01G128400.1	Wheat	plasma membrane	41.83	60.48
TraesCS6A01G128100.1	Wheat	plasma membrane	41.34	59.77
OQU84393	Sorghum	plasma membrane	41.54	59.64
TraesCS7A01G408300.1	Wheat	vacuole	17.7	59.48
TraesCS6A01G126400.1	Wheat	plasma membrane	41.93	59.45
TraesCS6A01G127400.1	Wheat	extracellular, plasma membrane, vacuole	41.34	59.44
TraesCS6A01G127300.1	Wheat	extracellular, plasma membrane, vacuole	41.44	59.41
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	41.05	59.35
TraesCS7A01G435300.1	Wheat	plasma membrane, plastid	61.19	59.17
TraesCS7A01G452500.1	Wheat	plasma membrane	41.05	58.29
TraesCS6A01G130000.1	Wheat	cytosol, golgi, peroxisome	36.67	57.03
TraesCS6A01G130200.1	Wheat	extracellular	39.2	56.84
TraesCS6A01G129900.1	Wheat	extracellular, plasma membrane	39.11	56.3
TraesCS6A01G129600.1	Wheat	extracellular	38.81	56.2
TraesCS4A01G273300.1	Wheat	cytosol, plasma membrane, plastid	35.89	56.08
TraesCS6A01G126700.1	Wheat	cytosol, golgi, peroxisome	25.58	55.96
TraesCS6A01G129700.1	Wheat	extracellular, plasma membrane, vacuole	38.52	55.62
Os02t0157100-00	Rice	extracellular	13.81	55.25
TraesCS6A01G128300.1	Wheat	cytosol	13.72	50.54
KRH68996	Soybean	plasma membrane	44.65	46.36
TraesCS6A01G128600.1	Wheat	cytosol, extracellular, golgi	6.91	45.51
KRH06301	Soybean	plasma membrane	46.89	45.26
TraesCS7A01G435000.1	Wheat	plasma membrane	46.89	44.59
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	46.6	44.43
PGSC0003DMT400023733	Potato	plasma membrane	45.43	42.92
CDY03644	Canola	plasma membrane	35.99	42.87
KRH47735	Soybean	plasma membrane	40.76	42.24
Bra008027.1-P	Field mustard	plasma membrane	43.58	41.6
Bra016068.1-P	Field mustard	plasma membrane	43.97	41.58
CDX96394	Canola	plasma membrane	43.97	41.54
CDX82157	Canola	plasma membrane	43.39	41.41
Solyc03g123780.2.1	Tomato	plasma membrane	37.26	41.32
AT1G72300.1	Thale cress	plasma membrane	43.0	40.37
TraesCS2A01G260000.1	Wheat	plasma membrane	39.01	39.39
CDY72222	Canola	cytosol, nucleus, plastid	3.89	39.22
TraesCS2A01G550200.1	Wheat	plasma membrane	39.69	39.08
TraesCS6A01G222000.1	Wheat	plasma membrane	39.01	38.3
CDX96780	Canola	mitochondrion, plasma membrane	24.9	37.54
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	24.81	37.39
CDX83918	Canola	mitochondrion, plasma membrane	24.71	37.24
TraesCS6A01G044700.1	Wheat	plasma membrane	38.42	36.61
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	19.46	36.43
AT1G17240.2	Thale cress	plasma membrane	25.68	35.97
TraesCS6A01G129000.1	Wheat	plasma membrane	41.44	35.35
AT1G17250.1	Thale cress	plasma membrane	25.58	34.79
CDX81812	Canola	extracellular, plasma membrane	17.41	33.27
TraesCS2A01G550700.1	Wheat	extracellular	23.74	32.8
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	8.66	30.9
CDY48482	Canola	plasma membrane	20.23	30.28
KRH06825	Soybean	cytosol, extracellular, nucleus	3.89	29.41

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR43932	PANTHER:PTHR43932:SF7	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G125600	EnsemblPlants:TraesCS6A01G125600.1	TIGR:cd14066
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:99012999..99016169

Molecular Weight (calculated)

113296.0 Da

IEP (calculated)

6.878

GRAVY (calculated)

-0.018

Length

1028 amino acids

Sequence
(BLAST)

0001: MQTLHFPNKT YSKILHIPSL GLALVLLICL ASPTSSCTEQ EKDSLLQFLG GLSQHGGLDA SWQHGTACCQ WEGITCSTDG IVTDILLASR SLQGHITPSL
0101: GNLTGLLRLN LSNNLLSGGV PQELVSSRSI LIVDVSFNRL RGDLHELSST HARPLKVLNI SSNLFTGQFP SSTWQVMKNL VALNASNNSF TGQLPTHFCA
0201: SSPSLAVLEL CYNQFRGSIP PEFGSCSMLR VLKVGHNRLS GTLPDELFNA TLLEYVSFPG NGLQGTLEGS HIGKLSNLST LDLGENSITG KIPEFIGHLK
0301: RLEELRLNNN LMYGELPSTL NNCTNLITID FKNNNFSGEL AKVNFSNLPY LKTLDLRNNS FRGKIPESIY SCSNLTALGL SFNNFHGQLS EKIGNLKYLS
0401: FLSLVKNNLT NITSALHLLR SSKNLTTLLI GLNFMKETMP DDDRIAGFEN LQVLAIAGCS LLGKIPHWLS KLEKLEILFL QDNQLTGQIP DWVSSLKFLF
0501: YLDISNNSMM GEIPTTLMQI PMLRSDNTAT HSDLRFFELP IYLALSLQYR VPMAFPKVLD LSSNKFSGKI PLEIGQLRAL CSLNFSFNDL TGQIPQSLSN
0601: LTSLQVLDLS TNNLTGGIPT ALNSLHFLSA FNISNNDLEG PIPSGASPPL IHSKLRHRKA LFAITFGVFF GSIAVLLLLG RLLVSIRVNG FTTKNTREKN
0701: NGDAESTSFN SSSEQTLVVM SRGKGEESKL KFTDILKATN NFDKENIIGC GGYGLVYKAE LPDGSKLAIK KLNSEMCLME REFSAEVDAL SNAQHENIVP
0801: LWGYCIQGNS KLLIYSYMEN GSLDDWLHNR DDEASSWLDW PTRLKIAQGA SLGLSHIHDV CKPQIVHRDI KCSNILLDKE FKAYVADFGL ARLILPNQTH
0901: VTTELVGTMG YIPPEYGQAW VATLRGDMYS FGVVMLELLT GIRPVSILST SKELVPWVLE MRSEGKQVEV LDPTLRGTGC EDQMLKVLEA ASKCVDHNQF
1001: MRPTIMEVVS CLASIDADPQ MRKSAKIQ

Best Arabidopsis Sequence Match ( AT1G72300.1 )
(BLAST)

0001: MIDEKMRSKS IGPFVRQVKP LSPHMVLFVL LYVLSISVFF LTVSEAVCNL QDRDSLLWFS GNVSSPVSPL HWNSSIDCCS WEGISCDKSP ENRVTSIILS
0101: SRGLSGNLPS SVLDLQRLSR LDLSHNRLSG PLPPGFLSAL DQLLVLDLSY NSFKGELPLQ QSFGNGSNGI FPIQTVDLSS NLLEGEILSS SVFLQGAFNL
0201: TSFNVSNNSF TGSIPSFMCT ASPQLTKLDF SYNDFSGDLS QELSRCSRLS VLRAGFNNLS GEIPKEIYNL PELEQLFLPV NRLSGKIDNG ITRLTKLTLL
0301: ELYSNHIEGE IPKDIGKLSK LSSLQLHVNN LMGSIPVSLA NCTKLVKLNL RVNQLGGTLS AIDFSRFQSL SILDLGNNSF TGEFPSTVYS CKMMTAMRFA
0401: GNKLTGQISP QVLELESLSF FTFSDNKMTN LTGALSILQG CKKLSTLIMA KNFYDETVPS NKDFLRSDGF PSLQIFGIGA CRLTGEIPAW LIKLQRVEVM
0501: DLSMNRFVGT IPGWLGTLPD LFYLDLSDNF LTGELPKELF QLRALMSQKA YDATERNYLE LPVFVNPNNV TTNQQYNQLS SLPPTIYIKR NNLTGTIPVE
0601: VGQLKVLHIL ELLGNNFSGS IPDELSNLTN LERLDLSNNN LSGRIPWSLT GLHFLSYFNV ANNTLSGPIP TGTQFDTFPK ANFEGNPLLC GGVLLTSCDP
0701: TQHSTTKMGK GKVNRTLVLG LVLGLFFGVS LILVLLALLV LSKRRVNPGD SENAELEINS NGSYSEVPPG SDKDISLVLL FGNSRYEVKD LTIFELLKAT
0801: DNFSQANIIG CGGFGLVYKA TLDNGTKLAV KKLTGDYGMM EKEFKAEVEV LSRAKHENLV ALQGYCVHDS ARILIYSFME NGSLDYWLHE NPEGPAQLDW
0901: PKRLNIMRGA SSGLAYMHQI CEPHIVHRDI KSSNILLDGN FKAYVADFGL SRLILPYRTH VTTELVGTLG YIPPEYGQAW VATLRGDVYS FGVVMLELLT
1001: GKRPMEVFRP KMSRELVAWV HTMKRDGKPE EVFDTLLRES GNEEAMLRVL DIACMCVNQN PMKRPNIQQV VDWLKNIEAE KNQNNREEPE EEEET

Arabidopsis Description

PSY1RLeucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGI8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.