Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- golgi 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G126700.1 | Wheat | cytosol, golgi, peroxisome | 93.59 | 31.06 |
| TraesCS6A01G128300.1 | Wheat | cytosol | 55.13 | 30.82 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 41.67 | 22.57 |
| Zm00001d005908_P001 | Maize | plastid | 57.69 | 20.88 |
| TraesCS6D01G118000.1 | Wheat | plastid | 97.44 | 20.57 |
| TraesCS6B01G157000.1 | Wheat | plasma membrane, plastid | 96.15 | 20.3 |
| TraesCS6A01G128100.1 | Wheat | plasma membrane | 73.72 | 16.17 |
| TraesCS6A01G126900.1 | Wheat | plasma membrane, vacuole | 72.44 | 15.89 |
| TraesCS6A01G124900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 58.33 | 15.19 |
| TraesCS6A01G128400.1 | Wheat | plasma membrane | 69.23 | 15.19 |
| TraesCS6A01G129900.1 | Wheat | extracellular, plasma membrane | 64.74 | 14.15 |
| TraesCS4A01G273300.1 | Wheat | cytosol, plasma membrane, plastid | 58.33 | 13.83 |
| Os02t0156400-01 | Rice | cytosol, mitochondrion, plasma membrane, vacuole | 63.46 | 13.79 |
| TraesCS6A01G129700.1 | Wheat | extracellular, plasma membrane, vacuole | 62.82 | 13.76 |
| TraesCS6A01G130200.1 | Wheat | extracellular | 60.9 | 13.4 |
| TraesCS6A01G130000.1 | Wheat | cytosol, golgi, peroxisome | 56.41 | 13.31 |
| EES06299 | Sorghum | plasma membrane | 60.26 | 13.2 |
| TraesCS6A01G129000.1 | Wheat | plasma membrane | 98.08 | 12.7 |
| TraesCS6A01G129600.1 | Wheat | extracellular | 57.69 | 12.68 |
| TraesCS6A01G127300.1 | Wheat | extracellular, plasma membrane, vacuole | 57.69 | 12.55 |
| TraesCS6A01G127500.1 | Wheat | plasma membrane | 57.05 | 12.4 |
| TraesCS6A01G124600.1 | Wheat | cytosol | 58.33 | 12.3 |
| TraesCS6A01G127400.1 | Wheat | extracellular, plasma membrane, vacuole | 55.13 | 12.03 |
| TraesCS6A01G126400.1 | Wheat | plasma membrane | 55.13 | 11.86 |
| CDX81812 | Canola | extracellular, plasma membrane | 39.74 | 11.52 |
| TraesCS7A01G452500.1 | Wheat | plasma membrane | 52.56 | 11.33 |
| TraesCS6A01G124300.1 | Wheat | plasma membrane | 67.31 | 10.0 |
| TraesCS6A01G126200.1 | Wheat | plasma membrane | 45.51 | 9.92 |
| Os02t0153100-00 | Rice | plasma membrane | 63.46 | 9.42 |
| Os02t0153200-01 | Rice | plasma membrane | 61.54 | 9.14 |
| TraesCS6A01G124800.1 | Wheat | plasma membrane | 60.26 | 8.94 |
| TraesCS6A01G125400.3 | Wheat | plasma membrane | 58.33 | 8.88 |
| AT1G17240.2 | Thale cress | plasma membrane | 41.67 | 8.86 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 38.46 | 8.8 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 38.46 | 8.8 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 38.46 | 8.8 |
| TraesCS6A01G125200.1 | Wheat | plasma membrane | 51.92 | 8.78 |
| TraesCS6A01G125500.1 | Wheat | plasma membrane | 58.97 | 8.7 |
| TraesCS6A01G125300.1 | Wheat | plasma membrane | 58.97 | 8.7 |
| TraesCS6A01G124700.1 | Wheat | plasma membrane | 57.69 | 8.56 |
| TraesCS6A01G125000.1 | Wheat | plasma membrane | 57.69 | 8.51 |
| TraesCS7A01G435300.1 | Wheat | plasma membrane, plastid | 56.41 | 8.28 |
| TraesCS6A01G124500.1 | Wheat | plasma membrane | 56.41 | 8.27 |
| AT1G17250.1 | Thale cress | plasma membrane | 39.1 | 8.07 |
| CDY03644 | Canola | plasma membrane | 42.95 | 7.76 |
| KRH68996 | Soybean | plasma membrane | 45.51 | 7.17 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 48.72 | 7.05 |
| TraesCS6A01G125600.1 | Wheat | plasma membrane | 45.51 | 6.91 |
| KRH47735 | Soybean | plasma membrane | 42.95 | 6.75 |
| TraesCS2A01G550700.1 | Wheat | extracellular | 32.05 | 6.72 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 46.15 | 6.62 |
| AT1G72300.1 | Thale cress | plasma membrane | 45.51 | 6.48 |
| KRH06301 | Soybean | plasma membrane | 44.23 | 6.48 |
| Bra016068.1-P | Field mustard | plasma membrane | 44.87 | 6.44 |
| CDX96394 | Canola | plasma membrane | 44.87 | 6.43 |
| Bra008027.1-P | Field mustard | plasma membrane | 43.59 | 6.31 |
| CDX82157 | Canola | plasma membrane | 43.59 | 6.31 |
| TraesCS2A01G260000.1 | Wheat | plasma membrane | 41.03 | 6.29 |
| TraesCS7A01G435000.1 | Wheat | plasma membrane | 41.67 | 6.01 |
| TraesCS6A01G222000.1 | Wheat | plasma membrane | 39.1 | 5.83 |
| TraesCS6A01G044700.1 | Wheat | plasma membrane | 39.1 | 5.65 |
| CDY48482 | Canola | plasma membrane | 24.36 | 5.53 |
| TraesCS2A01G550200.1 | Wheat | plasma membrane | 36.54 | 5.46 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 28.85 | 4.85 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
| TraesCS7A01G408300.1 | Wheat | vacuole | 0.0 | 0.0 |
| TraesCS6A01G128500.1 | Wheat | extracellular | 0.0 | 0.0 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 0.0 | 0.0 |
| TraesCS6A01G128200.1 | Wheat | vacuole | 0.0 | 0.0 |
| OQU84820 | Sorghum | extracellular, plastid, vacuole | 0.0 | 0.0 |
| TraesCS2A01G550600.1 | Wheat | extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G128600.1 | EnsemblPlantsGene:TraesCS6A01G128600 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF12 |
| PFAM:PF13855 | PRINTS:PR00019 | SEG:seg | SUPFAM:SSF52058 | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr6A:+:100762614..100763084
Molecular Weight (calculated)
16759.2 Da
IEP (calculated)
6.071
GRAVY (calculated)
0.081
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNFTGMIPA EIGRLQGLFS LNLSSNRLSG EIPEQICNLT NLQMLDLSGN HLTGKIPAAL NNLHFLSRFN ISNNDLEGPI PNMGQFSTFP DSSFGGNPKL
101: CGPMVANHCG SAEASPVSID PIKQIGSEAI IFMTSFGVFF GVGVLYDQKV LARHFG
101: CGPMVANHCG SAEASPVSID PIKQIGSEAI IFMTSFGVFF GVGVLYDQKV LARHFG
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.