Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G117900.1 | Wheat | plasma membrane, vacuole | 61.04 | 92.54 |
| TraesCS6A01G128500.1 | Wheat | extracellular | 49.51 | 78.92 |
| TraesCS6A01G128100.1 | Wheat | plasma membrane | 77.64 | 77.64 |
| TraesCS6A01G126900.1 | Wheat | plasma membrane, vacuole | 76.23 | 76.23 |
| HORVU6Hr1G024660.4 | Barley | extracellular, plasma membrane | 74.4 | 74.4 |
| TraesCS6A01G126700.1 | Wheat | cytosol, golgi, peroxisome | 47.68 | 72.13 |
| TraesCS6A01G128600.1 | Wheat | cytosol, extracellular, golgi | 15.19 | 69.23 |
| TraesCS6A01G128200.1 | Wheat | vacuole | 29.68 | 67.85 |
| Os02t0156400-01 | Rice | cytosol, mitochondrion, plasma membrane, vacuole | 64.42 | 63.79 |
| TraesCS6A01G127300.1 | Wheat | extracellular, plasma membrane, vacuole | 63.71 | 63.18 |
| TraesCS6A01G127400.1 | Wheat | extracellular, plasma membrane, vacuole | 62.73 | 62.38 |
| EES06299 | Sorghum | plasma membrane | 62.03 | 61.94 |
| OQU84820 | Sorghum | extracellular, plastid, vacuole | 29.25 | 61.36 |
| TraesCS6A01G127500.1 | Wheat | plasma membrane | 61.18 | 60.59 |
| TraesCS6A01G130200.1 | Wheat | extracellular | 59.63 | 59.8 |
| TraesCS6A01G129900.1 | Wheat | extracellular, plasma membrane | 59.92 | 59.66 |
| TraesCS6A01G130000.1 | Wheat | cytosol, golgi, peroxisome | 55.13 | 59.3 |
| TraesCS6A01G126200.1 | Wheat | plasma membrane | 59.63 | 59.22 |
| TraesCS6A01G129600.1 | Wheat | extracellular | 58.93 | 59.01 |
| TraesCS7A01G452500.1 | Wheat | plasma membrane | 59.92 | 58.84 |
| TraesCS6A01G126400.1 | Wheat | plasma membrane | 59.92 | 58.76 |
| TraesCS6A01G129700.1 | Wheat | extracellular, plasma membrane, vacuole | 58.79 | 58.71 |
| TraesCS4A01G273300.1 | Wheat | cytosol, plasma membrane, plastid | 53.87 | 58.21 |
| TraesCS7A01G408300.1 | Wheat | vacuole | 24.75 | 57.52 |
| TraesCS6A01G128300.1 | Wheat | cytosol | 21.52 | 54.84 |
| TraesCS6A01G124300.1 | Wheat | plasma membrane | 72.57 | 49.14 |
| Zm00001d005908_P001 | Maize | plastid | 29.68 | 48.96 |
| TraesCS6A01G125200.1 | Wheat | plasma membrane | 60.48 | 46.59 |
| Os02t0153100-00 | Rice | plasma membrane | 68.21 | 46.15 |
| Os02t0153200-01 | Rice | plasma membrane | 66.81 | 45.24 |
| TraesCS6A01G129000.1 | Wheat | plasma membrane | 74.4 | 43.9 |
| TraesCS6A01G124700.1 | Wheat | plasma membrane | 63.99 | 43.29 |
| TraesCS6A01G125500.1 | Wheat | plasma membrane | 64.14 | 43.14 |
| TraesCS6A01G125400.3 | Wheat | plasma membrane | 61.04 | 42.34 |
| TraesCS6A01G124800.1 | Wheat | plasma membrane | 62.59 | 42.3 |
| TraesCS6A01G124500.1 | Wheat | plasma membrane | 63.29 | 42.29 |
| TraesCS6A01G125300.1 | Wheat | plasma membrane | 62.73 | 42.19 |
| TraesCS6A01G125600.1 | Wheat | plasma membrane | 60.48 | 41.83 |
| TraesCS6A01G125000.1 | Wheat | plasma membrane | 62.17 | 41.78 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 36.85 | 38.42 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 36.57 | 38.12 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 36.43 | 37.98 |
| TraesCS7A01G435300.1 | Wheat | plasma membrane, plastid | 56.54 | 37.82 |
| AT1G17240.2 | Thale cress | plasma membrane | 38.12 | 36.92 |
| AT1G17250.1 | Thale cress | plasma membrane | 37.55 | 35.32 |
| TraesCS2A01G550600.1 | Wheat | extracellular, vacuole | 26.72 | 34.61 |
| CDX81812 | Canola | extracellular, plasma membrane | 25.04 | 33.09 |
| TraesCS6A01G124600.1 | Wheat | cytosol | 34.04 | 32.7 |
| TraesCS2A01G550700.1 | Wheat | extracellular | 33.19 | 31.72 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 12.52 | 30.9 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 5.63 | 29.41 |
| CDY48482 | Canola | plasma membrane | 27.85 | 28.82 |
| TraesCS7A01G435000.1 | Wheat | plasma membrane | 43.04 | 28.31 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 36.29 | 27.83 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 41.63 | 27.46 |
| KRH06301 | Soybean | plasma membrane | 39.94 | 26.67 |
| KRH47735 | Soybean | plasma membrane | 36.85 | 26.41 |
| KRH68996 | Soybean | plasma membrane | 36.29 | 26.06 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 39.8 | 26.01 |
| Bra008027.1-P | Field mustard | plasma membrane | 38.96 | 25.72 |
| Bra016068.1-P | Field mustard | plasma membrane | 39.24 | 25.67 |
| CDX96394 | Canola | plasma membrane | 39.24 | 25.64 |
| CDX82157 | Canola | plasma membrane | 38.68 | 25.53 |
| TraesCS2A01G550200.1 | Wheat | plasma membrane | 36.99 | 25.19 |
| AT1G72300.1 | Thale cress | plasma membrane | 37.83 | 24.57 |
| TraesCS2A01G260000.1 | Wheat | plasma membrane | 35.16 | 24.56 |
| TraesCS6A01G044700.1 | Wheat | plasma membrane | 37.13 | 24.47 |
| TraesCS6A01G124900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 19.83 | 23.54 |
| TraesCS6A01G222000.1 | Wheat | plasma membrane | 34.46 | 23.4 |
| CDY03644 | Canola | plasma membrane | 27.85 | 22.94 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 |
| PFAM:PF08263 | PFAM:PF13516 | PFAM:PF13855 | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF1 | SMART:SM00369 |
| SUPFAM:SSF52047 | SUPFAM:SSF52058 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G128400 | EnsemblPlants:TraesCS6A01G128400.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:100755407..100757542
Molecular Weight (calculated)
76704.2 Da
IEP (calculated)
5.095
GRAVY (calculated)
0.145
Length
711 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSHHCPNSS RFPLPFLGLA LVLLISLAPP TSSCTEQEKS SLLQLLAGFS QDGGLGASWR NDTDFCTWEG ITCSPNRTVS DVLLASRGLE GSISQFIGNL
101: TGLLRINLSC NSLSGGLPLE LVSSSSILVL DVSFNRLTGA LSELPSLTPA RPLQVVNISS NLFTGRFPST TWEVMKSLVA LNASNNSFTG QLPTTLCLSA
201: PSFVVLELSF NEFSGNIPPG LGNCSMLKLL GAGYNNLSGT LPDEVFKVTS LEHLSLPNNW LEGALDGIIK LTNLVTLDLG GNKLSGNIPD SIGQLKSLEE
301: LHLEQNHISG ELPSALSNCT HLTTISLKGN QFHGELTKVN FSNLPNLKKI DLLHNNFIGN IPESLYSCSN LTALRLSGNH LHGQLSEKIG NLKSLSFLSV
401: ANLSLTNITR TLQILGRSRS LTNLFIGSNF LHEAIPEDDS IDGFENLHVL SMSDCSLSGT IPGWLSKLTH LRMLFLQSNQ LTGPIPEWTS SLNLLFYLDI
501: SNNSFIGEIS TALMEMPMLK SDRTAPKVFF ELPVYLFSPF IQYLKPGAFP KVLNLAINNF TGAIPEEIGQ LRALVALNLS SNKLSGEIPQ EICNLRNLQV
601: LDLSVNHLTG IIPAALNNLN ILSEFDITNN DLEGPIPTGG QLSTFPDSSF DGNPKLCGPV IANPCGSAVA DPELTNSREQ ISTNAIFAIA FGAFFGVGVL
701: YDQMVLTRYF G
101: TGLLRINLSC NSLSGGLPLE LVSSSSILVL DVSFNRLTGA LSELPSLTPA RPLQVVNISS NLFTGRFPST TWEVMKSLVA LNASNNSFTG QLPTTLCLSA
201: PSFVVLELSF NEFSGNIPPG LGNCSMLKLL GAGYNNLSGT LPDEVFKVTS LEHLSLPNNW LEGALDGIIK LTNLVTLDLG GNKLSGNIPD SIGQLKSLEE
301: LHLEQNHISG ELPSALSNCT HLTTISLKGN QFHGELTKVN FSNLPNLKKI DLLHNNFIGN IPESLYSCSN LTALRLSGNH LHGQLSEKIG NLKSLSFLSV
401: ANLSLTNITR TLQILGRSRS LTNLFIGSNF LHEAIPEDDS IDGFENLHVL SMSDCSLSGT IPGWLSKLTH LRMLFLQSNQ LTGPIPEWTS SLNLLFYLDI
501: SNNSFIGEIS TALMEMPMLK SDRTAPKVFF ELPVYLFSPF IQYLKPGAFP KVLNLAINNF TGAIPEEIGQ LRALVALNLS SNKLSGEIPQ EICNLRNLQV
601: LDLSVNHLTG IIPAALNNLN ILSEFDITNN DLEGPIPTGG QLSTFPDSSF DGNPKLCGPV IANPCGSAVA DPELTNSREQ ISTNAIFAIA FGAFFGVGVL
701: YDQMVLTRYF G
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.