Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G128600.1 | Wheat | cytosol, extracellular, golgi | 31.06 | 93.59 |
| TraesCS6D01G117200.1 | Wheat | plasma membrane | 94.26 | 63.38 |
| TraesCS6B01G155000.1 | Wheat | plasma membrane | 94.26 | 63.38 |
| TraesCS6A01G128300.1 | Wheat | cytosol | 32.55 | 54.84 |
| TraesCS6A01G126900.1 | Wheat | plasma membrane, vacuole | 75.11 | 49.65 |
| TraesCS6A01G128100.1 | Wheat | plasma membrane | 74.47 | 49.23 |
| TraesCS6A01G128400.1 | Wheat | plasma membrane | 72.13 | 47.68 |
| TraesCS6A01G128500.1 | Wheat | extracellular | 45.11 | 47.53 |
| Zm00001d005908_P001 | Maize | plastid | 42.13 | 45.94 |
| TraesCS6A01G130000.1 | Wheat | cytosol, golgi, peroxisome | 59.36 | 42.21 |
| EES06299 | Sorghum | plasma membrane | 62.55 | 41.29 |
| TraesCS4A01G273300.1 | Wheat | cytosol, plasma membrane, plastid | 57.66 | 41.19 |
| Os02t0156400-01 | Rice | cytosol, mitochondrion, plasma membrane, vacuole | 62.34 | 40.81 |
| TraesCS6A01G129700.1 | Wheat | extracellular, plasma membrane, vacuole | 61.7 | 40.73 |
| TraesCS6A01G127300.1 | Wheat | extracellular, plasma membrane, vacuole | 60.85 | 39.89 |
| TraesCS6A01G130200.1 | Wheat | extracellular | 60.0 | 39.77 |
| TraesCS6A01G129900.1 | Wheat | extracellular, plasma membrane | 59.79 | 39.36 |
| TraesCS6A01G127500.1 | Wheat | plasma membrane | 59.57 | 39.0 |
| TraesCS6A01G129600.1 | Wheat | extracellular | 58.09 | 38.45 |
| TraesCS6A01G127400.1 | Wheat | extracellular, plasma membrane, vacuole | 58.3 | 38.32 |
| TraesCS7A01G452500.1 | Wheat | plasma membrane | 57.45 | 37.29 |
| TraesCS6A01G126200.1 | Wheat | plasma membrane | 56.6 | 37.15 |
| TraesCS6A01G126400.1 | Wheat | plasma membrane | 56.6 | 36.69 |
| TraesCS6A01G129000.1 | Wheat | plasma membrane | 91.49 | 35.68 |
| TraesCS6A01G124300.1 | Wheat | plasma membrane | 75.32 | 33.71 |
| TraesCS6A01G124600.1 | Wheat | cytosol | 51.91 | 32.97 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 19.15 | 31.25 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 8.94 | 30.88 |
| Os02t0153100-00 | Rice | plasma membrane | 66.38 | 29.69 |
| TraesCS6A01G125200.1 | Wheat | plasma membrane | 57.23 | 29.14 |
| Os02t0153200-01 | Rice | plasma membrane | 64.89 | 29.05 |
| TraesCS6A01G125500.1 | Wheat | plasma membrane | 62.98 | 28.0 |
| TraesCS6A01G124500.1 | Wheat | plasma membrane | 61.91 | 27.35 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 39.36 | 27.13 |
| TraesCS6A01G124700.1 | Wheat | plasma membrane | 60.43 | 27.02 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 39.15 | 26.98 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 39.15 | 26.98 |
| TraesCS6A01G124800.1 | Wheat | plasma membrane | 59.57 | 26.62 |
| TraesCS6A01G125400.3 | Wheat | plasma membrane | 57.87 | 26.54 |
| TraesCS6A01G125000.1 | Wheat | plasma membrane | 59.36 | 26.37 |
| AT1G17240.2 | Thale cress | plasma membrane | 40.64 | 26.02 |
| TraesCS6A01G125300.1 | Wheat | plasma membrane | 58.51 | 26.02 |
| CDX81812 | Canola | extracellular, plasma membrane | 29.36 | 25.65 |
| TraesCS6A01G125600.1 | Wheat | plasma membrane | 55.96 | 25.58 |
| TraesCS7A01G435300.1 | Wheat | plasma membrane, plastid | 56.17 | 24.84 |
| AT1G17250.1 | Thale cress | plasma membrane | 39.15 | 24.34 |
| TraesCS6A01G124900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.64 | 24.04 |
| TraesCS2A01G550700.1 | Wheat | extracellular | 35.96 | 22.72 |
| TraesCS2A01G550600.1 | Wheat | extracellular, vacuole | 25.53 | 21.86 |
| KRH47735 | Soybean | plasma membrane | 43.19 | 20.46 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 45.32 | 19.76 |
| KRH06301 | Soybean | plasma membrane | 43.4 | 19.15 |
| TraesCS7A01G435000.1 | Wheat | plasma membrane | 44.04 | 19.15 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 37.02 | 18.77 |
| CDY03644 | Canola | plasma membrane | 34.26 | 18.66 |
| TraesCS2A01G260000.1 | Wheat | plasma membrane | 40.21 | 18.57 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 42.34 | 18.29 |
| CDX82157 | Canola | plasma membrane | 40.64 | 17.73 |
| Bra008027.1-P | Field mustard | plasma membrane | 40.64 | 17.73 |
| AT1G72300.1 | Thale cress | plasma membrane | 41.06 | 17.63 |
| TraesCS6A01G044700.1 | Wheat | plasma membrane | 40.43 | 17.61 |
| Bra016068.1-P | Field mustard | plasma membrane | 40.64 | 17.57 |
| CDX96394 | Canola | plasma membrane | 40.64 | 17.56 |
| TraesCS2A01G550200.1 | Wheat | plasma membrane | 38.51 | 17.34 |
| CDY48482 | Canola | plasma membrane | 25.32 | 17.32 |
| KRH68996 | Soybean | plasma membrane | 36.38 | 17.27 |
| OQU84820 | Sorghum | extracellular, plastid, vacuole | 12.34 | 17.11 |
| TraesCS6A01G222000.1 | Wheat | plasma membrane | 36.38 | 16.33 |
| TraesCS6A01G128200.1 | Wheat | vacuole | 8.09 | 12.22 |
| TraesCS7A01G408300.1 | Wheat | vacuole | 6.81 | 10.46 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G126700.1 | EnsemblPlantsGene:TraesCS6A01G126700 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR43932 |
| PANTHER:PTHR43932:SF1 | PFAM:PF00560 | PFAM:PF13855 | PRINTS:PR00019 | SEG:seg | SMART:SM00369 |
| SUPFAM:SSF52058 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:100182979..100184391
Molecular Weight (calculated)
51501.0 Da
IEP (calculated)
5.395
GRAVY (calculated)
0.029
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSSKVISLE HLSLPNNRLE GALDGISKLT NLVTLDLGGN ELSGNIPESI GDVKRLEELH LEHNNMSGEL PAALSNCTNL VTIDLQANQF SVELTKVNFV
101: SLSNLKKLDL LSNNFTGTVP ESIYSCSKLT ALRLSYNPFH GQLSEEIGNL KSLSFLSLAN NSLTNITRTI RILSSSRSLT TLYLGFNFLH ETMPEDVNID
201: GFKNLQVLYI NHCSLSGKIP DWLSKLPNLG MLFLQGNKLT GPIPEWISSL KFLFSLDISN NSLTGEIPSA LMEMPMLESD STAPKVFFEL PVWNKNQFLQ
301: YLTPSAFPKE LNLAMNNFTG MIPEEIGQLQ GLFSLNLSSN RLSGEIPEQI CNLTNLQMLD LSGNHLTGKI PAALNNLHFL SRFNISNNDL EGTIPNAGQF
401: STFPDSSFGG NPKLCGSMVA NHCGSAKASS VSIDPIKQIG SEAIIFMTAF CVFFVVGVLY DQKVLARHFG
101: SLSNLKKLDL LSNNFTGTVP ESIYSCSKLT ALRLSYNPFH GQLSEEIGNL KSLSFLSLAN NSLTNITRTI RILSSSRSLT TLYLGFNFLH ETMPEDVNID
201: GFKNLQVLYI NHCSLSGKIP DWLSKLPNLG MLFLQGNKLT GPIPEWISSL KFLFSLDISN NSLTGEIPSA LMEMPMLESD STAPKVFFEL PVWNKNQFLQ
301: YLTPSAFPKE LNLAMNNFTG MIPEEIGQLQ GLFSLNLSSN RLSGEIPEQI CNLTNLQMLD LSGNHLTGKI PAALNNLHFL SRFNISNNDL EGTIPNAGQF
401: STFPDSSFGG NPKLCGSMVA NHCGSAKASS VSIDPIKQIG SEAIIFMTAF CVFFVVGVLY DQKVLARHFG
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.