Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G158000.1 | Wheat | extracellular, plasma membrane, vacuole | 75.84 | 62.26 |
| TraesCS6B01G154400.1 | Wheat | plastid | 54.7 | 59.49 |
| TraesCS6B01G155400.1 | Wheat | extracellular | 40.27 | 53.1 |
| TraesCS6B01G155800.1 | Wheat | mitochondrion | 51.68 | 49.52 |
| TraesCS6A01G130200.1 | Wheat | extracellular | 88.25 | 37.09 |
| TraesCS6D01G118900.1 | Wheat | extracellular | 84.23 | 35.35 |
| TraesCS6B01G154200.1 | Wheat | vacuole | 55.7 | 34.23 |
| TraesCS6B01G158200.1 | Wheat | extracellular, plasma membrane, vacuole | 75.84 | 31.7 |
| HORVU6Hr1G024860.15 | Barley | extracellular, plasma membrane, vacuole | 88.59 | 30.99 |
| TraesCS6B01G156800.2 | Wheat | endoplasmic reticulum, plasma membrane | 55.03 | 29.39 |
| TraesCS4B01G040700.1 | Wheat | extracellular, plasma membrane, vacuole | 67.11 | 28.01 |
| TraesCS6B01G154700.1 | Wheat | extracellular | 57.72 | 24.75 |
| TraesCS6B01G155000.1 | Wheat | plasma membrane | 57.38 | 24.46 |
| TraesCS6B01G154300.1 | Wheat | plasma membrane, vacuole | 58.05 | 24.16 |
| TraesCS6B01G155600.1 | Wheat | vacuole | 57.38 | 23.92 |
| TraesCS6B01G157000.1 | Wheat | plasma membrane, plastid | 57.38 | 23.14 |
| TraesCS6B01G145300.1 | Wheat | mitochondrion | 54.36 | 22.53 |
| EES06303 | Sorghum | plasma membrane | 52.68 | 21.36 |
| TraesCS7B01G334700.1 | Wheat | mitochondrion | 50.67 | 21.09 |
| TraesCS7B01G352400.1 | Wheat | mitochondrion | 42.28 | 19.33 |
| TraesCS6B01G153300.1 | Wheat | plasma membrane | 59.73 | 16.86 |
| TraesCS6B01G152800.1 | Wheat | plasma membrane | 59.06 | 16.67 |
| TraesCS6B01G152600.1 | Wheat | plasma membrane | 58.39 | 16.31 |
| TraesCS6B01G153100.1 | Wheat | plasma membrane | 56.71 | 16.03 |
| TraesCS6B01G153400.1 | Wheat | plasma membrane | 57.05 | 16.02 |
| TraesCS6B01G152300.1 | Wheat | plasma membrane | 56.04 | 16.01 |
| TraesCS6B01G152700.1 | Wheat | plasma membrane | 56.04 | 15.89 |
| Os02t0155700-00 | Rice | plasma membrane | 32.21 | 15.87 |
| TraesCS6B01G153700.1 | Wheat | plasma membrane | 55.37 | 15.73 |
| TraesCS7B01G335000.2 | Wheat | plasma membrane, plastid | 56.04 | 15.72 |
| TraesCS6B01G152900.1 | Wheat | plasma membrane | 55.03 | 15.63 |
| CDY48482 | Canola | plasma membrane | 35.91 | 15.57 |
| TraesCS6B01G153500.1 | Wheat | plasma membrane | 52.35 | 15.16 |
| AT1G17240.2 | Thale cress | plasma membrane | 34.56 | 14.03 |
| AT1G17250.1 | Thale cress | plasma membrane | 33.22 | 13.1 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 29.19 | 12.76 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 28.86 | 12.61 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 28.86 | 12.61 |
| TraesCS7B01G334900.1 | Wheat | plasma membrane | 43.96 | 12.1 |
| TraesCS2B01G581300.1 | Wheat | plasma membrane | 29.87 | 11.93 |
| TraesCS2B01G581100.1 | Wheat | extracellular, plasma membrane, vacuole | 29.53 | 11.81 |
| TraesCS2B01G581400.1 | Wheat | extracellular, plasma membrane | 28.86 | 11.3 |
| KRH68996 | Soybean | plasma membrane | 35.91 | 10.81 |
| KRH06301 | Soybean | plasma membrane | 37.92 | 10.61 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 37.92 | 10.48 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 32.55 | 10.46 |
| Bra008027.1-P | Field mustard | plasma membrane | 35.57 | 9.84 |
| Bra016068.1-P | Field mustard | plasma membrane | 35.57 | 9.75 |
| CDX96394 | Canola | plasma membrane | 35.57 | 9.74 |
| CDX82157 | Canola | plasma membrane | 34.56 | 9.56 |
| AT1G72300.1 | Thale cress | plasma membrane | 34.56 | 9.41 |
| KRH47735 | Soybean | plasma membrane | 30.2 | 9.07 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 32.89 | 9.01 |
| TraesCS2B01G580800.1 | Wheat | plasma membrane | 31.54 | 9.0 |
| TraesCS6B01G061000.1 | Wheat | plasma membrane | 30.54 | 8.47 |
| TraesCS2B01G281900.1 | Wheat | plasma membrane | 28.86 | 8.45 |
| TraesCS6B01G259100.1 | Wheat | plasma membrane | 29.53 | 8.37 |
| CDX81812 | Canola | extracellular, plasma membrane | 13.76 | 7.62 |
| CDY03644 | Canola | plasma membrane | 20.13 | 6.95 |
| TraesCS6B01G157800.1 | Wheat | cytosol | 3.36 | 2.45 |
| TraesCS6B01G154600.1 | Wheat | cytosol, golgi, plasma membrane | 3.69 | 2.43 |
| TraesCS6B01G155300.1 | Wheat | cytosol, golgi, plasma membrane | 3.02 | 2.23 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 2.01 | 2.08 |
| TraesCS6B01G155700.1 | Wheat | cytosol, golgi, plasma membrane, plastid | 2.01 | 1.64 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 0.67 | 1.47 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G158400.1 | EnsemblPlantsGene:TraesCS6B01G158400 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| ncoils:Coil | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF12 | PFAM:PF08263 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF52058 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:160903988..160904884
Molecular Weight (calculated)
31940.1 Da
IEP (calculated)
4.593
GRAVY (calculated)
0.099
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSFPVPPVV LQLFLLLFLA SPATACTEQE KRNLLRFLDG LSCDGGLATS WRNNGTDCCK WEGISCNGDG AVTGVSLESK GLEGPISPFL TNLTSLLRVN
101: LSHNSFSDGL PAELMFSGSI IVLDLSFNRL NGPLPELPPF LTTDRPLQVL NISSNQFSSQ FPSATWKVIN SLIALNASNN SFTGNMPSSL CLGSPYLALL
201: DLCYNQLSGD IPNTLGNCSK LKVLKAANNN LSGILPVETF HATLLEYLSF PNNGLQGELD GAHIVKVSNL ATPWRESLQW QDSGVDISAQ EAGGAAFR
101: LSHNSFSDGL PAELMFSGSI IVLDLSFNRL NGPLPELPPF LTTDRPLQVL NISSNQFSSQ FPSATWKVIN SLIALNASNN SFTGNMPSSL CLGSPYLALL
201: DLCYNQLSGD IPNTLGNCSK LKVLKAANNN LSGILPVETF HATLLEYLSF PNNGLQGELD GAHIVKVSNL ATPWRESLQW QDSGVDISAQ EAGGAAFR
001: MIDKEMRSKA KGLVRPLITK PVQPLSSHMH LFLLCILFLS ALFLTLSEAV CNLQDRESLI WFSGNVSSSV SPLNWNLSID CCSWEGITCD DSSDSHVTVI
101: SLPSRGLSGT LASSVQNIHR LSRLDLSYNR LSGPLPPGFF STLDQLMILN LSYNSFNGEL PLEQAFGNES NRFFSIQTLD LSSNLLEGEI LRSSVYLQGT
201: INLISFNVSN NSFTGPIPSF MCRSSPQLSK LDFSYNDFSG HISQELGRCL RLTVLQAGFN NLSGVIPSEI YNLSELEQLF LPANQLTGKI DNNITRLRKL
301: TSLALYSNHL EGEIPMDIGN LSSLRSLQLH INNINGTVPL SLANCTKLVK LNLRVNQLGG GLTELEFSQL QSLKVLDLGN NSFTGALPDK IFSCKSLTAI
401: RFAGNKLTGE ISPQVLELES LSFMGLSDNK LTNITGALSI LQGCRKLSTL ILAKNFYDET VPSKEDFLSP DGFPKLRIFG VGACRLRGEI PAWLINLNKV
501: EVMDLSMNRF VGSIPGWLGT LPDLFYLDLS DNLLTGELPK ELFQLRALMS QKITENNYLE LPIFLNPNNV TTNQQYNKLY SFPPTIYIRR NNLTGSIPVE
601: VGQLKVLHIL ELLGNNLSGS IPDELSNLTN LERLDLSNNN LSGSIPWSLT NLNFLSYFNV ANNSLEGPIP SEGQFDTFPK ANFEGNPLLC GGVLLTSCKP
701: TRAKENDELN RTFLMGIAIG YFLSFVSILV VRAW
101: SLPSRGLSGT LASSVQNIHR LSRLDLSYNR LSGPLPPGFF STLDQLMILN LSYNSFNGEL PLEQAFGNES NRFFSIQTLD LSSNLLEGEI LRSSVYLQGT
201: INLISFNVSN NSFTGPIPSF MCRSSPQLSK LDFSYNDFSG HISQELGRCL RLTVLQAGFN NLSGVIPSEI YNLSELEQLF LPANQLTGKI DNNITRLRKL
301: TSLALYSNHL EGEIPMDIGN LSSLRSLQLH INNINGTVPL SLANCTKLVK LNLRVNQLGG GLTELEFSQL QSLKVLDLGN NSFTGALPDK IFSCKSLTAI
401: RFAGNKLTGE ISPQVLELES LSFMGLSDNK LTNITGALSI LQGCRKLSTL ILAKNFYDET VPSKEDFLSP DGFPKLRIFG VGACRLRGEI PAWLINLNKV
501: EVMDLSMNRF VGSIPGWLGT LPDLFYLDLS DNLLTGELPK ELFQLRALMS QKITENNYLE LPIFLNPNNV TTNQQYNKLY SFPPTIYIRR NNLTGSIPVE
601: VGQLKVLHIL ELLGNNLSGS IPDELSNLTN LERLDLSNNN LSGSIPWSLT NLNFLSYFNV ANNSLEGPIP SEGQFDTFPK ANFEGNPLLC GGVLLTSCKP
701: TRAKENDELN RTFLMGIAIG YFLSFVSILV VRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.