Factsheet for TraesCS6B01G145300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G154400.1	Wheat	plastid	25.03	65.69
TraesCS6B01G155800.1	Wheat	mitochondrion	27.68	63.99
TraesCS6B01G154700.1	Wheat	extracellular	61.75	63.88
TraesCS6B01G156800.2	Wheat	endoplasmic reticulum, plasma membrane	48.96	63.08
TraesCS6B01G155300.1	Wheat	cytosol, golgi, plasma membrane	35.19	62.62
TraesCS6B01G154200.1	Wheat	vacuole	42.0	62.27
TraesCS6B01G155000.1	Wheat	plasma membrane	60.08	61.8
TraesCS6B01G155700.1	Wheat	cytosol, golgi, plasma membrane, plastid	31.15	61.2
TraesCS6B01G155400.1	Wheat	extracellular	19.19	61.06
TraesCS6B01G155600.1	Wheat	vacuole	59.67	60.0
TraesCS6B01G154300.1	Wheat	plasma membrane, vacuole	59.11	59.36
TraesCS6B01G157000.1	Wheat	plasma membrane, plastid	60.92	59.27
TraesCS6B01G158200.1	Wheat	extracellular, plasma membrane, vacuole	58.55	59.05
TraesCS6B01G154600.1	Wheat	cytosol, golgi, plasma membrane	37.13	58.94
TraesCS7B01G352400.1	Wheat	mitochondrion	53.41	58.9
OQU84393	Sorghum	plasma membrane	58.55	58.8
TraesCS6B01G158000.1	Wheat	extracellular, plasma membrane, vacuole	29.21	57.85
TraesCS6B01G157800.1	Wheat	cytosol	32.55	57.35
TraesCS4B01G040700.1	Wheat	extracellular, plasma membrane, vacuole	56.05	56.44
Os02t0157100-00	Rice	extracellular	19.47	54.47
TraesCS6B01G158400.1	Wheat	extracellular	22.53	54.36
TraesCS7B01G334700.1	Wheat	mitochondrion	53.13	53.35
TraesCS6B01G153400.1	Wheat	plasma membrane	65.65	44.49
Os02t0153500-00	Rice	plasma membrane	64.81	44.42
Os02t0154200-01	Rice	plasma membrane	63.0	43.18
EES06297	Sorghum	plasma membrane	63.0	42.9
TraesCS6B01G152900.1	Wheat	plasma membrane	61.47	42.14
TraesCS6B01G152300.1	Wheat	plasma membrane	61.06	42.09
TraesCS6B01G153700.1	Wheat	plasma membrane	60.36	41.37
TraesCS6B01G152800.1	Wheat	plasma membrane	60.5	41.19
TraesCS6B01G153300.1	Wheat	plasma membrane	59.53	40.53
TraesCS6B01G153500.1	Wheat	plasma membrane	57.72	40.33
TraesCS6B01G153100.1	Wheat	plasma membrane	58.83	40.13
CDX96780	Canola	mitochondrion, plasma membrane	37.97	40.03
TraesCS6B01G152600.1	Wheat	plasma membrane	59.39	40.02
OQU84392	Sorghum	plasma membrane	57.3	39.88
CDX83918	Canola	mitochondrion, plasma membrane	37.83	39.88
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	37.83	39.88
TraesCS6B01G152700.1	Wheat	plasma membrane	58.14	39.77
AT1G17240.2	Thale cress	plasma membrane	39.22	38.42
Zm00001d053867_P001	Maize	plasma membrane	58.14	38.42
TraesCS7B01G335000.2	Wheat	plasma membrane, plastid	54.94	37.19
AT1G17250.1	Thale cress	plasma membrane	38.94	37.04
TraesCS2B01G581300.1	Wheat	plasma membrane	35.19	33.91
CDX81812	Canola	extracellular, plasma membrane	25.31	33.83
TraesCS2B01G581100.1	Wheat	extracellular, plasma membrane, vacuole	34.91	33.69
KRH06825	Soybean	cytosol, extracellular, nucleus	6.26	33.09
TraesCS2B01G581400.1	Wheat	extracellular, plasma membrane	34.77	32.85
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.93	32.29
CDY48482	Canola	plasma membrane	29.76	31.15
KRH06301	Soybean	plasma membrane	41.45	27.98
Solyc03g123780.2.1	Tomato	plasma membrane	36.02	27.94
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	41.31	27.55
KRH47735	Soybean	plasma membrane	37.97	27.52
TraesCS7B01G334900.1	Wheat	plasma membrane	41.17	27.33
KRH68996	Soybean	plasma membrane	37.41	27.17
Bra016068.1-P	Field mustard	plasma membrane	39.5	26.13
CDX96394	Canola	plasma membrane	39.5	26.1
Bra008027.1-P	Field mustard	plasma membrane	39.08	26.09
PGSC0003DMT400023733	Potato	plasma membrane	39.36	26.01
CDX82157	Canola	plasma membrane	38.66	25.81
AT1G72300.1	Thale cress	plasma membrane	39.08	25.66
TraesCS2B01G580800.1	Wheat	plasma membrane	35.6	24.52
TraesCS6B01G061000.1	Wheat	plasma membrane	36.44	24.39
TraesCS2B01G281900.1	Wheat	plasma membrane	34.08	24.07
TraesCS6B01G259100.1	Wheat	plasma membrane	34.77	23.76
CDY03644	Canola	plasma membrane	27.96	23.29
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G145300.1	EnsemblPlantsGene:TraesCS6B01G145300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR43932	PANTHER:PTHR43932:SF12	PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM
SMART:SM00369	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6B:+:145340301..145342460

Molecular Weight (calculated)

78016.5 Da

IEP (calculated)

6.666

GRAVY (calculated)

0.102

Length

719 amino acids

Sequence
(BLAST)

001: MLPLHCSYMR HIRKLPMSSP GLALLLLISL ASPTSSCTEQ DKTSLLQFHA GLLPEGGLLA WQNHTDCCMW EGITCSAKGM VTDVSLASRS LQGHISPSLG
101: NLTGLLRLDL SSNLLSGGLP PELLSSGSII AIDVSVNRLE GEFQELAPAS ATPDRPLKVL NISSNLFTGP FPSTTWRVMR NMVVLSASNN SFTGKLPTDM
201: CTSSPSLAVL ELSHNQFSGR IWPVLGRCSM LKVLKAGFNN LSGTLPDELF NATSLELLSL PRNGLHGTLE GANIIKLSHL ATLDLGDNNF NGNIPESVGQ
301: LQRLQELHLN DNMMSGELPS TLTNCTNLMT IDLKGNNFSG ELAKVNFSKL PSLRILDLMS NTFSGTIPES IYSCRNLTAL RLSSNKFHGE LAEGLRNLTS
401: LSFLSLGNNS LTNITKALKI LGSSKNLTTL LIAHNFMYEV MPQDDTIKGF QNLQVFSINS CSLSGQIPRW LSKLTNLGAL MLHDNQLTGS IPDWISNLNF
501: LYFLQISNNS LTGEIPTALA QMPMLRSEKT GAHLDPRGFQ LPIYLGPSLQ ISMDSAFRKV LDLSVNKLVG EIPREIGLLK AIWGLNLSSN LLSGEIPQSI
601: CNLTNLQVLD LSINHLSGTI PTALNDLHFL SEFNVSNNEL QGPIPTGGQI STFQSSSFDG NPRLCGPLLN RYCDLAQAAP VPITSANRWS IEVIFSIAFG
701: VFFGVGVLYD QLVLSKFYG

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.