Factsheet for TraesCS6B01G154300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

mitochondrion 1
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G155600.1	Wheat	vacuole	71.51	71.61
TraesCS7B01G352400.1	Wheat	mitochondrion	62.99	69.17
TraesCS6B01G154400.1	Wheat	plastid	25.14	65.69
TraesCS6B01G154200.1	Wheat	vacuole	44.13	65.15
TraesCS6B01G156800.2	Wheat	endoplasmic reticulum, plasma membrane	48.74	62.54
TraesCS6B01G154700.1	Wheat	extracellular	60.61	62.45
TraesCS6B01G155700.1	Wheat	cytosol, golgi, plasma membrane, plastid	31.84	62.3
TraesCS6B01G155000.1	Wheat	plasma membrane	60.34	61.8
TraesCS6B01G155400.1	Wheat	extracellular	19.41	61.5
TraesCS6B01G155800.1	Wheat	mitochondrion	26.68	61.41
TraesCS6B01G157000.1	Wheat	plasma membrane, plastid	61.17	59.27
TraesCS6B01G145300.1	Wheat	mitochondrion	59.36	59.11
TraesCS6B01G158000.1	Wheat	extracellular, plasma membrane, vacuole	29.89	58.95
TraesCS6B01G155300.1	Wheat	cytosol, golgi, plasma membrane	33.24	58.91
TraesCS6B01G158200.1	Wheat	extracellular, plasma membrane, vacuole	57.96	58.2
TraesCS6B01G158400.1	Wheat	extracellular	24.16	58.05
TraesCS4B01G040700.1	Wheat	extracellular, plasma membrane, vacuole	57.68	57.84
TraesCS6B01G154600.1	Wheat	cytosol, golgi, plasma membrane	35.75	56.51
TraesCS6B01G157800.1	Wheat	cytosol	32.12	56.37
TraesCS7B01G334700.1	Wheat	mitochondrion	53.63	53.63
TraesCS6B01G153100.1	Wheat	plasma membrane	74.86	50.85
TraesCS6B01G153300.1	Wheat	plasma membrane	74.72	50.66
TraesCS6B01G152700.1	Wheat	plasma membrane	71.79	48.91
TraesCS6B01G153500.1	Wheat	plasma membrane	69.83	48.59
TraesCS6B01G153700.1	Wheat	plasma membrane	68.58	46.81
TraesCS6B01G152900.1	Wheat	plasma membrane	67.74	46.23
Os02t0153700-01	Rice	plasma membrane	65.92	45.08
TraesCS6B01G152800.1	Wheat	plasma membrane	66.34	44.98
TraesCS6B01G153400.1	Wheat	plasma membrane	64.94	43.83
Os02t0154000-00	Rice	plasma membrane	62.85	43.02
TraesCS6B01G152600.1	Wheat	plasma membrane	62.71	42.08
TraesCS6B01G152300.1	Wheat	plasma membrane	60.2	41.32
TraesCS6A01G124600.1	Wheat	cytosol	39.94	38.65
TraesCS7B01G335000.2	Wheat	plasma membrane, plastid	57.12	38.51
AT1G17240.2	Thale cress	plasma membrane	38.97	38.01
CDX96780	Canola	mitochondrion, plasma membrane	36.03	37.83
CDX83918	Canola	mitochondrion, plasma membrane	36.03	37.83
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	35.89	37.68
AT1G17250.1	Thale cress	plasma membrane	37.01	35.05
CDX81812	Canola	extracellular, plasma membrane	25.42	33.83
TraesCS2B01G581100.1	Wheat	extracellular, plasma membrane, vacuole	33.66	32.35
TraesCS2B01G581300.1	Wheat	plasma membrane	33.66	32.31
TraesCS2B01G581400.1	Wheat	extracellular, plasma membrane	32.68	30.75
CDY48482	Canola	plasma membrane	29.33	30.57
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.15	30.21
KRH06825	Soybean	cytosol, extracellular, nucleus	5.59	29.41
TraesCS7B01G334900.1	Wheat	plasma membrane	42.18	27.89
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	41.9	27.83
KRH06301	Soybean	plasma membrane	41.06	27.61
KRH47735	Soybean	plasma membrane	37.85	27.32
Solyc03g123780.2.1	Tomato	plasma membrane	35.34	27.29
KRH68996	Soybean	plasma membrane	36.87	26.67
Bra016068.1-P	Field mustard	plasma membrane	39.66	26.13
CDX96394	Canola	plasma membrane	39.66	26.1
Bra008027.1-P	Field mustard	plasma membrane	38.69	25.72
CDX82157	Canola	plasma membrane	38.27	25.44
PGSC0003DMT400023733	Potato	plasma membrane	38.55	25.37
AT1G72300.1	Thale cress	plasma membrane	38.41	25.11
TraesCS6B01G061000.1	Wheat	plasma membrane	37.57	25.05
TraesCS2B01G281900.1	Wheat	plasma membrane	35.47	24.95
TraesCS2B01G580800.1	Wheat	plasma membrane	35.61	24.43
TraesCS6B01G259100.1	Wheat	plasma membrane	35.06	23.86
CDY03644	Canola	plasma membrane	26.96	22.36
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF7	SMART:SM00369
SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G154300	EnsemblPlants:TraesCS6B01G154300.1	SEG:seg

Description

No Description!

Coordinates

chr6B:+:157900321..157902471

Molecular Weight (calculated)

78683.4 Da

IEP (calculated)

5.759

GRAVY (calculated)

0.011

Length

716 amino acids

Sequence
(BLAST)

001: MQSLHFSYKT HTNKLHIPSL GLALMLLVCL ASHTSSCTEQ EKGSLLQFLA KLSQDGGLAA SWRNGTNCCK WEGITCREDG TVTAVLLPSK GLHGHISQSL
101: GNLTGLQYLD LSDNLLSGGL PVELVFSNSI TTLDVSFNRL NSILDELPSS TPDRSMQVLN ISSNLFVGQF PSTIWKAMGN LVALNASNNS FTGQIPAYFC
201: ETSPFFAVLD LCFNKFSGNI PQGLCDCSRL RELRAGNNNL SGTLPDELFN ATLLEYLSFP NNDLHGALDD VLIINLRNIV TLDLGGNKFS GRIPDSIGQL
301: KKLEEFHLDN NMMLGELPSA LSNCTNLRTI DIKTNKFSGE LTKVNFSNLP SLKTLDLLNN NFTGTVPESI YSCSNLTALR LEGNKLHGQL SPQISNLKSL
401: SFLALGKNNF TNITNTLQIL KSCRNITTLL IGDNFKGELM PEDDSNDGFE NLQVLDIKDC QLSGEIPVWI SRLTHLKMLL LNSNQLTGPI PTWISSLRYL
501: FFMDVSNNNL IGEILLTFTE MPMLTDSKTH LDPRVFELPL YKGPSLQYRV VTSFPNTLNL SNNNFTGVIP PQIGQLEVLG VLDFSFNKLF GQIPQSFCNL
601: TNLQVLDLSN NNLTGDIPAA LNSLHFLSAF SISNNDLQGP IPSGGQFETF QNSSFDGNPK LCGSILSHKC VSVKAQEAII LSRKQTDYKV GFVIAFSAFF
701: GVGVLYDQLV LSRYFS

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.