Factsheet for TraesCS6B01G158200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G119600.1	Wheat	plasma membrane	97.48	97.48
TraesCS6B01G158000.1	Wheat	extracellular, plasma membrane, vacuole	41.09	80.72
TraesCS6B01G157800.1	Wheat	cytosol	45.44	79.41
TraesCS6A01G129700.1	Wheat	extracellular, plasma membrane, vacuole	78.68	78.79
TraesCS6B01G158400.1	Wheat	extracellular	31.7	75.84
TraesCS4B01G040700.1	Wheat	extracellular, plasma membrane, vacuole	68.3	68.21
HORVU6Hr1G024800.2	Barley	cytosol, plasma membrane	73.63	65.95
TraesCS6B01G154400.1	Wheat	plastid	24.54	63.87
TraesCS6B01G154700.1	Wheat	extracellular	61.15	62.73
TraesCS6B01G154200.1	Wheat	vacuole	41.09	60.41
TraesCS6B01G155600.1	Wheat	vacuole	60.03	59.86
TraesCS6B01G155300.1	Wheat	cytosol, golgi, plasma membrane	33.8	59.65
TraesCS6B01G155000.1	Wheat	plasma membrane	57.64	58.8
TraesCS6B01G145300.1	Wheat	mitochondrion	59.05	58.55
TraesCS7B01G352400.1	Wheat	mitochondrion	53.16	58.13
TraesCS6B01G155400.1	Wheat	extracellular	18.37	57.96
TraesCS6B01G154300.1	Wheat	plasma membrane, vacuole	58.2	57.96
TraesCS6B01G156800.2	Wheat	endoplasmic reticulum, plasma membrane	45.3	57.89
TraesCS6B01G154600.1	Wheat	cytosol, golgi, plasma membrane	36.61	57.62
TraesCS6B01G155700.1	Wheat	cytosol, golgi, plasma membrane, plastid	29.45	57.38
TraesCS6B01G157000.1	Wheat	plasma membrane, plastid	59.47	57.37
Os02t0155700-00	Rice	plasma membrane	48.53	57.19
EES06303	Sorghum	plasma membrane	58.77	57.01
TraesCS6B01G155800.1	Wheat	mitochondrion	24.54	56.27
TraesCS7B01G334700.1	Wheat	mitochondrion	52.17	51.96
TraesCS6B01G152300.1	Wheat	plasma membrane	60.45	41.32
TraesCS6B01G153300.1	Wheat	plasma membrane	61.01	41.19
TraesCS6B01G153700.1	Wheat	plasma membrane	60.17	40.9
TraesCS6B01G153100.1	Wheat	plasma membrane	59.75	40.42
TraesCS6B01G152900.1	Wheat	plasma membrane	59.19	40.23
TraesCS6B01G153500.1	Wheat	plasma membrane	57.64	39.94
TraesCS6B01G153400.1	Wheat	plasma membrane	59.33	39.87
TraesCS6B01G152700.1	Wheat	plasma membrane	58.77	39.87
TraesCS6B01G152800.1	Wheat	plasma membrane	58.77	39.68
TraesCS6B01G152600.1	Wheat	plasma membrane	58.91	39.36
CDX83918	Canola	mitochondrion, plasma membrane	35.9	37.54
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	35.76	37.39
CDX96780	Canola	mitochondrion, plasma membrane	35.62	37.24
AT1G17240.2	Thale cress	plasma membrane	38.01	36.92
TraesCS7B01G335000.2	Wheat	plasma membrane, plastid	54.98	36.91
AT1G17250.1	Thale cress	plasma membrane	37.87	35.71
CDX81812	Canola	extracellular, plasma membrane	25.11	33.27
TraesCS2B01G581300.1	Wheat	plasma membrane	33.1	31.64
TraesCS2B01G581100.1	Wheat	extracellular, plasma membrane, vacuole	32.68	31.28
TraesCS2B01G581400.1	Wheat	extracellular, plasma membrane	33.1	31.01
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.48	30.9
KRH06825	Soybean	cytosol, extracellular, nucleus	5.89	30.88
TraesCS7B01G334900.1	Wheat	plasma membrane	44.6	29.36
CDY48482	Canola	plasma membrane	27.77	28.82
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	43.2	28.57
KRH06301	Soybean	plasma membrane	41.51	27.79
Solyc03g123780.2.1	Tomato	plasma membrane	35.9	27.62
KRH47735	Soybean	plasma membrane	37.45	26.92
KRH68996	Soybean	plasma membrane	37.03	26.67
PGSC0003DMT400023733	Potato	plasma membrane	39.27	25.74
Bra008027.1-P	Field mustard	plasma membrane	38.71	25.63
Bra016068.1-P	Field mustard	plasma membrane	38.85	25.48
CDX96394	Canola	plasma membrane	38.85	25.46
AT1G72300.1	Thale cress	plasma membrane	38.99	25.39
CDX82157	Canola	plasma membrane	38.29	25.35
TraesCS2B01G281900.1	Wheat	plasma membrane	35.2	24.66
TraesCS2B01G580800.1	Wheat	plasma membrane	36.04	24.62
TraesCS6B01G061000.1	Wheat	plasma membrane	36.19	24.02
TraesCS6B01G259100.1	Wheat	plasma membrane	35.06	23.76
CDY03644	Canola	plasma membrane	28.33	23.41
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G158200.1	EnsemblPlantsGene:TraesCS6B01G158200	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR43932	PANTHER:PTHR43932:SF12	PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM
SMART:SM00369	SUPFAM:SSF52047	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6B:-:160714799..160716940

Molecular Weight (calculated)

77906.2 Da

IEP (calculated)

6.195

GRAVY (calculated)

0.102

Length

713 amino acids

Sequence
(BLAST)

001: MHFFTVPPVV LQLFVLLILA SPAAACIEQE KRNLLGFLAG LSQDGGLATS WRDNGTDCCE WEGITCNGDG AVTEVSLASR GLEGRILPSL ADLTSLQRVN
101: LSYNSFSGGL PLELMSSGSI IVLDVSFSRL NGPLPELPSL VTADRPLQVL NISSNQFSSE FPSAIWKMTK NLIALNASNN SFTGHIPSSL CLGSPSLTLL
201: DLCYNRLSGD IPTTLGDCSK LKVLKVGHNN LSGTLPVETF HATSLEYLSL PNNGLQGELD RAHMIKLSNL LTLDLGGNHF GGNIPESIGQ LRSLEELHLG
301: SNNMSGELPS TLGNCTNLKT IDLKFNNFSG DLGKVKFATL QNLKSLDLMS NNLSGMLPES IYSCRNLTAL RLSYNNFHGE ISLRIGNLKH LSFLSLVRNS
401: FTNIAKTLHG LKSCKNISVL LIGKTFMNEV MPQDETIHGF QNLQHLAIHQ CSLTGRIPIW LSKLTNLKML DLYSNQLTGP MPSWINSLNH LFRLDVSNNS
501: LTGEIPITLM QMPMFKSDKA AVYSDPSLLD LDLIIYVAES STLQYRIDSA WAKVLNLGKN KFTGVIPQEI GQLKALLFLD LSSNNFYGVI PQSICDLTNL
601: QQLDPSNNHL TGEIPAALEI LRFLSQFNIS YNDLEGPIPT TGQLSTFQTS SFDGNPKLCG SLLIRDCSSV EEAPMHIISA KECSTKVIFA IAFGLFFGVG
701: VLYDQLVLFR YFG

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.