Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G038100.1 | Wheat | extracellular | 93.7 | 93.7 |
| TraesCS4A01G273300.1 | Wheat | cytosol, plasma membrane, plastid | 85.15 | 92.4 |
| HORVU0Hr1G031790.1 | Barley | cytosol | 39.64 | 84.73 |
| HORVU4Hr1G006450.1 | Barley | cytosol | 82.35 | 84.12 |
| TraesCS6B01G158000.1 | Wheat | extracellular, plasma membrane, vacuole | 35.29 | 69.42 |
| HORVU4Hr1G006540.1 | Barley | extracellular | 32.63 | 69.14 |
| TraesCS6B01G158200.1 | Wheat | extracellular, plasma membrane, vacuole | 68.21 | 68.3 |
| TraesCS6B01G158400.1 | Wheat | extracellular | 28.01 | 67.11 |
| TraesCS6B01G154400.1 | Wheat | plastid | 25.49 | 66.42 |
| TraesCS6B01G157800.1 | Wheat | cytosol | 37.25 | 65.2 |
| TraesCS6B01G154200.1 | Wheat | vacuole | 41.18 | 60.62 |
| TraesCS6B01G154700.1 | Wheat | extracellular | 58.96 | 60.58 |
| TraesCS6B01G155600.1 | Wheat | vacuole | 59.94 | 59.86 |
| TraesCS6B01G155400.1 | Wheat | extracellular | 18.91 | 59.73 |
| TraesCS6B01G155800.1 | Wheat | mitochondrion | 25.63 | 58.84 |
| TraesCS6B01G155000.1 | Wheat | plasma membrane | 57.42 | 58.66 |
| TraesCS6B01G154300.1 | Wheat | plasma membrane, vacuole | 57.84 | 57.68 |
| TraesCS6B01G157000.1 | Wheat | plasma membrane, plastid | 59.1 | 57.1 |
| TraesCS6B01G156800.2 | Wheat | endoplasmic reticulum, plasma membrane | 44.4 | 56.81 |
| TraesCS7B01G352400.1 | Wheat | mitochondrion | 51.54 | 56.44 |
| Os02t0155700-00 | Rice | plasma membrane | 47.62 | 56.2 |
| TraesCS6B01G155300.1 | Wheat | cytosol, golgi, plasma membrane | 31.79 | 56.19 |
| TraesCS6B01G145300.1 | Wheat | mitochondrion | 56.44 | 56.05 |
| EES06303 | Sorghum | plasma membrane | 57.42 | 55.78 |
| TraesCS6B01G154600.1 | Wheat | cytosol, golgi, plasma membrane | 34.87 | 54.97 |
| TraesCS6B01G155700.1 | Wheat | cytosol, golgi, plasma membrane, plastid | 28.15 | 54.92 |
| TraesCS7B01G334700.1 | Wheat | mitochondrion | 51.68 | 51.54 |
| TraesCS6B01G153300.1 | Wheat | plasma membrane | 61.62 | 41.67 |
| TraesCS6B01G152800.1 | Wheat | plasma membrane | 60.22 | 40.72 |
| TraesCS6B01G152700.1 | Wheat | plasma membrane | 59.1 | 40.15 |
| TraesCS6B01G152300.1 | Wheat | plasma membrane | 58.54 | 40.08 |
| TraesCS6B01G153700.1 | Wheat | plasma membrane | 58.68 | 39.94 |
| TraesCS6B01G153500.1 | Wheat | plasma membrane | 57.42 | 39.84 |
| TraesCS6B01G153400.1 | Wheat | plasma membrane | 58.82 | 39.59 |
| TraesCS6B01G153100.1 | Wheat | plasma membrane | 58.26 | 39.47 |
| TraesCS6B01G152900.1 | Wheat | plasma membrane | 57.98 | 39.47 |
| TraesCS6B01G152600.1 | Wheat | plasma membrane | 58.4 | 39.08 |
| TraesCS7B01G335000.2 | Wheat | plasma membrane, plastid | 55.32 | 37.19 |
| AT1G17240.2 | Thale cress | plasma membrane | 37.82 | 36.78 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 35.01 | 36.66 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 34.87 | 36.51 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 34.73 | 36.36 |
| AT1G17250.1 | Thale cress | plasma membrane | 37.4 | 35.32 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 6.58 | 34.56 |
| CDX81812 | Canola | extracellular, plasma membrane | 25.07 | 33.27 |
| TraesCS2B01G581300.1 | Wheat | plasma membrane | 33.19 | 31.77 |
| TraesCS2B01G581100.1 | Wheat | extracellular, plasma membrane, vacuole | 33.05 | 31.68 |
| TraesCS2B01G581400.1 | Wheat | extracellular, plasma membrane | 32.63 | 30.62 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 12.04 | 29.86 |
| TraesCS7B01G334900.1 | Wheat | plasma membrane | 44.26 | 29.18 |
| CDY48482 | Canola | plasma membrane | 27.87 | 28.97 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 42.86 | 28.39 |
| KRH06301 | Soybean | plasma membrane | 41.32 | 27.7 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 35.57 | 27.4 |
| KRH47735 | Soybean | plasma membrane | 37.4 | 26.92 |
| KRH68996 | Soybean | plasma membrane | 36.55 | 26.36 |
| Bra016068.1-P | Field mustard | plasma membrane | 39.36 | 25.85 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 39.36 | 25.83 |
| CDX96394 | Canola | plasma membrane | 39.36 | 25.83 |
| Bra008027.1-P | Field mustard | plasma membrane | 38.38 | 25.44 |
| CDX82157 | Canola | plasma membrane | 38.24 | 25.35 |
| AT1G72300.1 | Thale cress | plasma membrane | 38.38 | 25.02 |
| TraesCS2B01G580800.1 | Wheat | plasma membrane | 35.43 | 24.23 |
| TraesCS6B01G061000.1 | Wheat | plasma membrane | 35.57 | 23.65 |
| TraesCS2B01G281900.1 | Wheat | plasma membrane | 33.33 | 23.38 |
| CDY03644 | Canola | plasma membrane | 28.15 | 23.29 |
| TraesCS6B01G259100.1 | Wheat | plasma membrane | 33.47 | 22.72 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.14 | 0.98 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G040700.1 | EnsemblPlantsGene:TraesCS4B01G040700 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| PANTHER:PTHR43932 | PANTHER:PTHR43932:SF12 | PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | SEG:seg |
| SignalP:SignalP-noTM | SMART:SM00369 | SUPFAM:SSF52058 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4B:-:28317840..28319984
Molecular Weight (calculated)
78465.8 Da
IEP (calculated)
7.220
GRAVY (calculated)
0.136
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSAALVTLQ LFLLLLSLAS PARSCTEQEE HSLLQFLTGL SQDGGLTVSW RNGTDCCEWE GITCDREGGV TAVSLASRGI EGRISPHLAG LTGLLRVNLS
101: HNSFSGGLPP ELMYSRSIIV LDVSFSRLSG VLHEPPSSVT YARPLQVLNI SSNQFGAEFP SHTWKVMQNL VVLNVSNNSF TGHIPLSLCL SPSLAMLDLC
201: YNQLSGSIPA ALGACSKLKV FKVGHNNLSG TLPAELFHAT SLEHLSFPNN GLQGELDGAS IVKLSNLVTL DLRENKFSGK IPRSIGQLKR LQELYLGNNN
301: MSGEVPSTLS NCTRLMIIDL KINNFSGELG RVNFSTLQNL THLDVLRNNF SGIVPESIYS CRNLIALRVS LNHFHGEISP RIGNLHLSFL SLARNPFTNI
401: TKAFHVFNGF RNITTLIIAE NFVNEMMPQD ETLDGFRNLQ YIHMADSALT GHLPVWLSKL RNLKVLKLSN NRLTGPMPGW INSLNSLFYL DVSNNSFTGQ
501: IPIALMEIPM LKDNTAAYLD PGHVELPLFW RNISRQYHFL TAFPTLLNLS INNFTGVIPS EIGQLKVLSE LDFSSNKLYG LVPLSICNLT KLEVLDLSNN
601: HLTGVIPAAL ERLHFLSAFN ISNNDLEGSV PAGGQLSTFP DSSFDGNPKL CGTTLIHQCS SVRADPIYII SAKQPSVKVI FFIGFGLFFG VGVLYDQLVL
701: YRYFGSAHFN CNLF
101: HNSFSGGLPP ELMYSRSIIV LDVSFSRLSG VLHEPPSSVT YARPLQVLNI SSNQFGAEFP SHTWKVMQNL VVLNVSNNSF TGHIPLSLCL SPSLAMLDLC
201: YNQLSGSIPA ALGACSKLKV FKVGHNNLSG TLPAELFHAT SLEHLSFPNN GLQGELDGAS IVKLSNLVTL DLRENKFSGK IPRSIGQLKR LQELYLGNNN
301: MSGEVPSTLS NCTRLMIIDL KINNFSGELG RVNFSTLQNL THLDVLRNNF SGIVPESIYS CRNLIALRVS LNHFHGEISP RIGNLHLSFL SLARNPFTNI
401: TKAFHVFNGF RNITTLIIAE NFVNEMMPQD ETLDGFRNLQ YIHMADSALT GHLPVWLSKL RNLKVLKLSN NRLTGPMPGW INSLNSLFYL DVSNNSFTGQ
501: IPIALMEIPM LKDNTAAYLD PGHVELPLFW RNISRQYHFL TAFPTLLNLS INNFTGVIPS EIGQLKVLSE LDFSSNKLYG LVPLSICNLT KLEVLDLSNN
601: HLTGVIPAAL ERLHFLSAFN ISNNDLEGSV PAGGQLSTFP DSSFDGNPKL CGTTLIHQCS SVRADPIYII SAKQPSVKVI FFIGFGLFFG VGVLYDQLVL
701: YRYFGSAHFN CNLF
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.