Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G050010.1 | Barley | cytosol | 92.5 | 92.5 |
| HORVU2Hr1G046130.1 | Barley | cytosol | 66.88 | 64.85 |
| HORVU3Hr1G061440.1 | Barley | extracellular | 36.88 | 35.12 |
| HORVU0Hr1G031790.1 | Barley | cytosol | 43.12 | 20.66 |
| HORVU4Hr1G006540.1 | Barley | extracellular | 41.25 | 19.58 |
| TraesCS7D01G441600.1 | Wheat | cytosol, plasma membrane | 54.38 | 18.59 |
| HORVU6Hr1G018240.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 47.5 | 17.97 |
| HORVU2Hr1G055170.1 | Barley | cytosol, mitochondrion, vacuole | 40.62 | 17.2 |
| HORVU4Hr1G080720.1 | Barley | vacuole | 46.25 | 15.74 |
| HORVU6Hr1G024660.4 | Barley | extracellular, plasma membrane | 49.38 | 11.11 |
| HORVU6Hr1G031910.6 | Barley | endoplasmic reticulum, vacuole | 51.25 | 10.54 |
| HORVU0Hr1G015280.1 | Barley | plasma membrane | 59.38 | 10.49 |
| HORVU6Hr1G023210.3 | Barley | extracellular, plasma membrane | 48.75 | 10.2 |
| HORVU4Hr1G006450.1 | Barley | cytosol | 41.88 | 9.59 |
| HORVU6Hr1G024860.15 | Barley | extracellular, plasma membrane, vacuole | 49.38 | 9.27 |
| HORVU6Hr1G023730.2 | Barley | plasma membrane | 59.38 | 9.24 |
| HORVU6Hr1G023340.1 | Barley | plasma membrane | 59.38 | 9.0 |
| HORVU6Hr1G024800.2 | Barley | cytosol, plasma membrane | 43.75 | 8.79 |
| HORVU6Hr1G023290.1 | Barley | plasma membrane | 56.88 | 8.5 |
| Os02t0153700-01 | Rice | plasma membrane | 52.5 | 8.02 |
| CDX81812 | Canola | extracellular, plasma membrane | 26.25 | 7.81 |
| Os02t0154000-00 | Rice | plasma membrane | 49.38 | 7.55 |
| HORVU6Hr1G023090.1 | Barley | plasma membrane, plastid | 50.62 | 7.55 |
| CDY48482 | Canola | plasma membrane | 31.88 | 7.42 |
| HORVU6Hr1G023100.9 | Barley | plasma membrane | 48.75 | 7.35 |
| HORVU6Hr1G023770.2 | Barley | plasma membrane | 48.75 | 7.32 |
| AT1G17240.2 | Thale cress | plasma membrane | 31.25 | 6.81 |
| HORVU7Hr1G099550.1 | Barley | plasma membrane, plastid | 46.88 | 6.77 |
| AT1G17250.1 | Thale cress | plasma membrane | 31.25 | 6.61 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 27.5 | 6.45 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 25.62 | 6.01 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 25.62 | 6.01 |
| KRH47735 | Soybean | plasma membrane | 35.62 | 5.75 |
| KRH06301 | Soybean | plasma membrane | 36.25 | 5.45 |
| KRH68996 | Soybean | plasma membrane | 32.5 | 5.25 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 35.0 | 5.19 |
| HORVU7Hr1G099520.1 | Barley | plasma membrane | 35.0 | 5.17 |
| Bra016068.1-P | Field mustard | plasma membrane | 35.0 | 5.15 |
| CDX96394 | Canola | plasma membrane | 35.0 | 5.15 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 28.75 | 4.96 |
| Bra008027.1-P | Field mustard | plasma membrane | 31.25 | 4.64 |
| AT1G72300.1 | Thale cress | plasma membrane | 31.25 | 4.57 |
| HORVU6Hr1G058960.1 | Barley | plasma membrane | 30.0 | 4.56 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 30.62 | 4.5 |
| CDX82157 | Canola | plasma membrane | 30.0 | 4.46 |
| HORVU6Hr1G009270.1 | Barley | plasma membrane | 30.0 | 4.4 |
| HORVU6Hr1G022420.10 | Barley | cytosol | 8.12 | 4.39 |
| CDY03644 | Canola | plasma membrane | 21.88 | 4.06 |
| HORVU7Hr1G102080.4 | Barley | cytosol, plastid | 8.75 | 3.19 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 1.88 | 2.21 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 3.75 | 2.08 |
| HORVU4Hr1G023740.3 | Barley | plastid | 9.38 | 1.95 |
| HORVU6Hr1G024590.1 | Barley | cytosol, golgi, peroxisome | 3.12 | 1.79 |
| HORVU7Hr1G094290.1 | Barley | plasma membrane | 2.5 | 1.61 |
| HORVU2Hr1G120830.2 | Barley | plasma membrane | 8.75 | 1.34 |
| HORVU6Hr1G059580.1 | Barley | plasma membrane | 3.12 | 0.88 |
| HORVU6Hr1G023370.1 | Barley | cytosol | 0.62 | 0.22 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
| HORVU6Hr1G009120.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G070330.1 | EnsemblPlantsGene:HORVU5Hr1G070330 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF7 |
| PFAM:PF00560 | SEG:seg | SUPFAM:SSF52058 | UniParc:UPI000B47BD83 | UniProt:A0A287RPW9 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr5H:-:528011964..528012458
Molecular Weight (calculated)
17911.4 Da
IEP (calculated)
6.706
GRAVY (calculated)
-0.008
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: WENGTDCCKW EGITCRQDRT VTHVLLPFKG LEGNISWSLG ILDALQHLDL SHNSLSSGLP SELVSSSSIT ILDVSFNQLN GTLHELPSSA LPRPFQVLNI
101: LTIYLQDTFH PSQWRIWSHS MLAITTLVGR YKLNYVVPHH PSLCLNCVSM NSVEASPKSW
101: LTIYLQDTFH PSQWRIWSHS MLAITTLVGR YKLNYVVPHH PSLCLNCVSM NSVEASPKSW
001: MTNEGRFKAK GFVRTSSTTR PIQALSFHMI GILLQCVLFI SVLSIAVSEA LCNSQDRESL LWFSGNVSSS VSPLNWNPSI DCCSWEGITC DDSPDSHITA
101: ISLPFRALYG KLPLSVLRLH HLSQLNLSHN RLSGHLPSGF LSALDQLKVL DLSYNSLDGE LPVEQTFRNG SNRCFPIRIV DLSSNFLQGE ILPSSIFMQG
201: TFDLISFNVS KNSFTGSIPS FMCKSSPQLS KLDFSYNDFT GNIPQGLGRC LKLSVLQAGF NNISGEIPSD IYNLSELEQL FLPVNHLSGK INDDITHLTK
301: LKSLELYSNH LGGEIPMDIG QLSRLQSLQL HINNITGTVP PSLANCTNLV KLNLRLNRLE GTLSELDFSR FQSLSILDLG NNSFSGDFPW RVHSCKSLSA
401: MRFASNKLTG QISPHVLELE SLSILSLSDN KLMNITGALG ILQGCRNLST LLIGKNFYNE TFPSDKDLIS SDGFPNLQIF ASGGSGLRGE IPAWLIKLKS
501: LAVIDLSHNQ LVGSIPGWLG TFPHLFYIDL SENLLSGELP KDLFQLKALM SQKAYDATER NYLKLPVFVS PNNVTTHQQY NQLFSLPPGI YIRRNNLKGS
601: IPIEVGQLKV LHVLELSHNY LSGIIPHELS KLTSLERLDL SNNHLSGRIP WSLTSLHYMS YFNVVNNSLD GPIPTGSQFD TFPQANFKGN PLLCGGILLT
701: SCKASTKLPA TTTNKADTED EEELKFIFIL GVATGFFVSY CFYWCFFARL DAFISK
101: ISLPFRALYG KLPLSVLRLH HLSQLNLSHN RLSGHLPSGF LSALDQLKVL DLSYNSLDGE LPVEQTFRNG SNRCFPIRIV DLSSNFLQGE ILPSSIFMQG
201: TFDLISFNVS KNSFTGSIPS FMCKSSPQLS KLDFSYNDFT GNIPQGLGRC LKLSVLQAGF NNISGEIPSD IYNLSELEQL FLPVNHLSGK INDDITHLTK
301: LKSLELYSNH LGGEIPMDIG QLSRLQSLQL HINNITGTVP PSLANCTNLV KLNLRLNRLE GTLSELDFSR FQSLSILDLG NNSFSGDFPW RVHSCKSLSA
401: MRFASNKLTG QISPHVLELE SLSILSLSDN KLMNITGALG ILQGCRNLST LLIGKNFYNE TFPSDKDLIS SDGFPNLQIF ASGGSGLRGE IPAWLIKLKS
501: LAVIDLSHNQ LVGSIPGWLG TFPHLFYIDL SENLLSGELP KDLFQLKALM SQKAYDATER NYLKLPVFVS PNNVTTHQQY NQLFSLPPGI YIRRNNLKGS
601: IPIEVGQLKV LHVLELSHNY LSGIIPHELS KLTSLERLDL SNNHLSGRIP WSLTSLHYMS YFNVVNNSLD GPIPTGSQFD TFPQANFKGN PLLCGGILLT
701: SCKASTKLPA TTTNKADTED EEELKFIFIL GVATGFFVSY CFYWCFFARL DAFISK
Arabidopsis Description
AtRLP3RLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WD64]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.