Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G491200.1 | Wheat | cytosol, plasma membrane | 96.72 | 99.16 |
| TraesCS2A01G468300.1 | Wheat | cytosol | 95.9 | 98.32 |
| Os04t0624000-01 | Rice | cytosol | 92.62 | 94.96 |
| KXG27147 | Sorghum | cytosol | 91.8 | 93.33 |
| Zm00001d002257_P005 | Maize | cytosol | 91.8 | 93.33 |
| Zm00001d026335_P003 | Maize | cytosol | 91.8 | 93.33 |
| Zm00001d018568_P001 | Maize | cytosol | 84.43 | 85.12 |
| HORVU2Hr1G046860.2 | Barley | cytosol, plastid | 85.25 | 65.0 |
| HORVU5Hr1G049440.1 | Barley | cytosol | 50.0 | 52.59 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G103010.2 | EnsemblPlantsGene:HORVU2Hr1G103010 | Gene3D:3.10.20.90 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006914 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| InterPro:Atg8-like | InterPro:Ubiquitin-like_domsf | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF47 | PFAM:PF02991 | SUPFAM:SSF54236 |
| UniParc:UPI000295A5EF | UniProt:M0YZY8 | MapMan:19.3.3.1 | : | : | : |
Description
Autophagy-related protein [Source:UniProtKB/TrEMBL;Acc:M0YZY8]
Coordinates
chrchr2H:-:698900914..698903541
Molecular Weight (calculated)
13920.8 Da
IEP (calculated)
9.280
GRAVY (calculated)
-0.384
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSSFKLEH PLERRQAEAN RIREKYSDRI PVIVEKAGKS DIPDIDKKKY LVPADLTVGQ FVYVVRKRIK LSAEKAIFIF VKNTLPPTAA LMSAIYEENK
101: DEDGFLYMTY SGENTFGSLE SL
101: DEDGFLYMTY SGENTFGSLE SL
001: MIFACLKFAE TNRIAMAKSS FKISNPLEAR MSESSRIREK YPDRIPVIVE KAGQSDVPDI DKKKYLVPAD LTVGQFVYVV RKRIKLGAEK AIFVFVKNTL
101: PPTAALMSAI YEEHKDEDGF LYMTYSGENT FGSLTVA
101: PPTAALMSAI YEEHKDEDGF LYMTYSGENT FGSLTVA
Arabidopsis Description
APG8AAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A8MS84]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.