Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG27147 | Sorghum | cytosol | 90.91 | 91.67 |
| Zm00001d002257_P005 | Maize | cytosol | 90.91 | 91.67 |
| Zm00001d026335_P003 | Maize | cytosol | 90.91 | 91.67 |
| TraesCS2B01G491200.1 | Wheat | cytosol, plasma membrane | 85.95 | 87.39 |
| Zm00001d049405_P001 | Maize | cytosol | 85.95 | 87.39 |
| TraesCS2A01G468300.1 | Wheat | cytosol | 85.12 | 86.55 |
| Os04t0624000-01 | Rice | cytosol | 84.3 | 85.71 |
| HORVU2Hr1G103010.2 | Barley | cytosol | 85.12 | 84.43 |
| Zm00001d024239_P002 | Maize | cytosol | 80.17 | 82.2 |
| Zm00001d006474_P002 | Maize | nucleus | 75.21 | 43.54 |
Protein Annotations
| MapMan:19.3.3.1 | Gene3D:3.10.20.90 | UniProt:A0A1D6HQC9 | ProteinID:AQK76477.1 | ProteinID:AQK76480.1 | InterPro:Atg8-like |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006914 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | PFAM:PF02991 | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF47 |
| SUPFAM:SSF54236 | UniParc:UPI000844C796 | InterPro:Ubiquitin-like_domsf | EnsemblPlantsGene:Zm00001d018568 | EnsemblPlants:Zm00001d018568_P001 | EnsemblPlants:Zm00001d018568_T001 |
Description
Autophagy-related protein 8c
Coordinates
chr5:-:223363140..223366282
Molecular Weight (calculated)
13924.0 Da
IEP (calculated)
9.977
GRAVY (calculated)
-0.252
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTSSFKLE HPLEKRQSEA NRIREKYPDR IPVIVEKLRG VIFLTSTRKS QYLVPADLTV GQFVYVVRKR IKLSAEKAIF IFVKNTLPPT AALMSSIYEE
101: NKDEDGFLYM TYSGENTFGL L
101: NKDEDGFLYM TYSGENTFGL L
001: MANSSFKLEH PLERRQIESS RIREKYPDRI PVIVERAERS DVPNIDKKKY LVPADLTVGQ FVYVVRKRIK LSAEKAIFVF VKNTLPPTAA MMSAIYDENK
101: DEDGFLYMTY SGENTFGLV
101: DEDGFLYMTY SGENTFGLV
Arabidopsis Description
ATG8CAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178W309]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.