Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0191600-01 | Rice | cytosol | 94.07 | 92.5 |
| Zm00001d049405_P001 | Maize | cytosol | 93.22 | 92.44 |
| Zm00001d002257_P005 | Maize | cytosol | 90.68 | 89.17 |
| Zm00001d026335_P003 | Maize | cytosol | 90.68 | 89.17 |
| Zm00001d018568_P001 | Maize | cytosol | 82.2 | 80.17 |
| Zm00001d006474_P002 | Maize | nucleus | 79.66 | 44.98 |
Protein Annotations
| MapMan:19.3.3.1 | Gene3D:3.10.20.90 | UniProt:A0A1D6IYD0 | ProteinID:AQK40892.1 | ProteinID:AQK40893.1 | InterPro:Atg8-like |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006914 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | PFAM:PF02991 | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF47 |
| SUPFAM:SSF54236 | UniParc:UPI00084384ED | InterPro:Ubiquitin-like_domsf | EnsemblPlantsGene:Zm00001d024239 | EnsemblPlants:Zm00001d024239_P002 | EnsemblPlants:Zm00001d024239_T002 |
Description
autophagy8dAutophagy 8e variant 1Autophagy-protein 8 isoform 1%3B Autophagy 8e variant 1Autophagy-protein 8 isoform 2%3B Autophagy 8e variant 1Autophagy-protein 8 isoform 3%3B Autophagy-related 8d variant 1%3B Autophagy-related protein 8
Coordinates
chr10:+:59002720..59005171
Molecular Weight (calculated)
13738.6 Da
IEP (calculated)
6.892
GRAVY (calculated)
-0.301
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MYMYPFILES AERRQAEANR IREKYPDRIP VIVEKAERSD IPDIDKKKYL VPADLTVGQF VYVVRKRIKL SAEKAIFIFV KNTLPPTAAL MSAIYEENKD
101: EDGFLYMTYS GENTFGLF
101: EDGFLYMTYS GENTFGLF
001: MAISSFKHEH PLVEMNIDVE VTKFHLSLLC SVVESLLFTG RRIAISVPWN PKILSLKKRQ AEAARIREKY PDRIPVIVER AEKSDVPDID RKKYLVPADL
101: TVGQFVYVVR KRIKLSPEKA IFIFVKNILP PTAAIMSAIY EEHKDEDGFL YMSYSGENTF GIFF
101: TVGQFVYVVR KRIKLSPEKA IFIFVKNILP PTAAIMSAIY EEHKDEDGFL YMSYSGENTF GIFF
Arabidopsis Description
ATG8DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:F4IHC1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.