Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99442 | Sorghum | cytosol | 52.15 | 91.6 |
| Os07t0512200-01 | Rice | cytosol | 50.72 | 89.08 |
| TraesCS2D01G229900.1 | Wheat | cytosol | 49.76 | 87.39 |
| TraesCS2B01G274200.1 | Wheat | cytosol | 49.76 | 87.39 |
| TraesCS2A01G224000.1 | Wheat | cytosol | 49.76 | 87.39 |
| GSMUA_Achr5P02890_001 | Banana | cytosol | 47.37 | 83.19 |
| PGSC0003DMT400042494 | Potato | cytosol | 48.33 | 82.11 |
| Solyc02g080590.2.1 | Tomato | cytosol | 48.33 | 82.11 |
| Zm00001d026335_P003 | Maize | cytosol | 46.89 | 81.67 |
| Zm00001d002257_P005 | Maize | cytosol | 46.89 | 81.67 |
| AT1G62040.1 | Thale cress | cytosol | 45.93 | 80.67 |
| KRH11438 | Soybean | cytosol, mitochondrion | 45.93 | 80.67 |
| KRH36460 | Soybean | cytosol, mitochondrion | 45.93 | 80.67 |
| VIT_10s0116g01700.t01 | Wine grape | cytosol | 46.89 | 80.33 |
| Zm00001d049405_P001 | Maize | cytosol | 45.45 | 79.83 |
| Zm00001d024239_P002 | Maize | cytosol | 44.98 | 79.66 |
| CDY07250 | Canola | cytosol | 44.02 | 77.31 |
| KRH51096 | Soybean | cytosol | 46.89 | 75.97 |
| Zm00001d018568_P001 | Maize | cytosol | 43.54 | 75.21 |
| KRH02062 | Soybean | cytosol | 46.41 | 75.19 |
| Bra021303.1-P | Field mustard | cytosol | 28.23 | 71.08 |
| CDY24873 | Canola | cytosol | 29.67 | 65.96 |
| HORVU2Hr1G046860.2 | Barley | cytosol, plastid | 49.76 | 65.0 |
Protein Annotations
| EntrezGene:100240694 | MapMan:19.3.3.1 | Gene3D:3.10.20.90 | UniProt:A0A1D6EWW6 | InterPro:Atg8-like | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006914 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | ProteinID:ONM23986.1 | PFAM:PF02991 | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF47 |
| SUPFAM:SSF54236 | UniParc:UPI0008423A5D | InterPro:Ubiquitin-like_domsf | EnsemblPlantsGene:Zm00001d006474 | EnsemblPlants:Zm00001d006474_P002 | EnsemblPlants:Zm00001d006474_T002 |
Description
autophagy8aAutophagy-related protein 8a
Coordinates
chr2:-:209341868..209344124
Molecular Weight (calculated)
23186.9 Da
IEP (calculated)
9.907
GRAVY (calculated)
-0.491
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MPWRGGRCCG EAEALQKRSC LRNTTVAPGL LSKSLAIEAI INKGDTPSPP NPTPTRDFAQ LPPIGLPRRF RQPLDPIGSI DRTSSSGCRW PGPLSKWSTT
101: SVEKRQSESA RIRDKYPDRI PVIVEKAGKT DVPEIDKKKY LVPADLTVGQ FVYVVRKRIK LSPEKAIFVF VKNTLPPTAS LMSAIYEENK DEDGFLYMTY
201: SGENTFGSA
101: SVEKRQSESA RIRDKYPDRI PVIVEKAGKT DVPEIDKKKY LVPADLTVGQ FVYVVRKRIK LSPEKAIFVF VKNTLPPTAS LMSAIYEENK DEDGFLYMTY
201: SGENTFGSA
001: MANSSFKLEH PLERRQIESS RIREKYPDRI PVIVERAERS DVPNIDKKKY LVPADLTVGQ FVYVVRKRIK LSAEKAIFVF VKNTLPPTAA MMSAIYDENK
101: DEDGFLYMTY SGENTFGLV
101: DEDGFLYMTY SGENTFGLV
Arabidopsis Description
ATG8CAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178W309]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.