CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02062	Soybean	cytosol	94.57	94.57
KRH36460	Soybean	cytosol, mitochondrion	83.72	90.76
KRH11438	Soybean	cytosol, mitochondrion	83.72	90.76
GSMUA_Achr5P02890_001	Banana	cytosol	80.62	87.39
TraesCS2D01G229900.1	Wheat	cytosol	79.84	86.55
TraesCS2B01G274200.1	Wheat	cytosol	79.84	86.55
TraesCS2A01G224000.1	Wheat	cytosol	79.84	86.55
Os07t0512200-01	Rice	cytosol	79.07	85.71
EER99442	Sorghum	cytosol	79.07	85.71
PGSC0003DMT400042494	Potato	cytosol	80.62	84.55
Solyc02g080590.2.1	Tomato	cytosol	80.62	84.55
VIT_10s0116g01700.t01	Wine grape	cytosol	79.84	84.43
KRH25368	Soybean	cytosol	77.52	83.33
Bra029509.1-P	Field mustard	cytosol	77.52	83.33
CDY16657	Canola	cytosol	77.52	83.33
KRH56143	Soybean	cytosol	76.74	82.5
CDX94567	Canola	cytosol	75.97	81.67
CDX98722	Canola	cytosol	77.52	80.65
Bra019407.1-P	Field mustard	cytosol	77.52	80.65
CDX82891	Canola	cytosol	75.19	79.51
CDX79116	Canola	cytosol	75.19	79.51
Bra013578.1-P	Field mustard	cytosol	75.19	79.51
AT4G04620.3	Thale cress	cytosol	74.42	78.69
KRH77376	Soybean	cytosol	73.64	77.24
AT4G21980.2	Thale cress	cytosol	81.4	76.64
CDX94071	Canola	cytosol	81.4	76.64
CDX82890	Canola	cytosol	73.64	76.61
KRH04111	Soybean	cytosol	75.97	76.56
KRH12706	Soybean	cytosol	41.86	73.97
KRH57384	Soybean	cytosol	74.42	71.64
HORVU2Hr1G046860.2	Barley	cytosol, plastid	79.84	64.38
KRH28060	Soybean	cytosol	74.42	62.34
CDY31453	Canola	cytosol	63.57	60.74
KRH69161	Soybean	cytosol	50.39	53.28
KRH31741	Soybean	cytosol	49.61	52.46
Zm00001d006474_P002	Maize	nucleus	75.97	46.89

Protein Annotations

EntrezGene:100500023	MapMan:19.3.3.1	Gene3D:3.10.20.90	EMBL:ACUP02004727	InterPro:Atg8-like	EnsemblPlantsGene:GLYMA_07G261000
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006914	GO:GO:0006950
GO:GO:0006995	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605
GO:GO:0009987	GO:GO:0009991	UniProt:I1KND4	EnsemblPlants:KRH51096	ProteinID:KRH51096	ProteinID:KRH51096.1
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF47	SUPFAM:SSF54236	UniParc:UPI0001BA53D3	InterPro:Ubiquitin-like_domsf

Description

hypothetical protein

Coordinates

chr7:+:43631430..43634624

Molecular Weight (calculated)

14873.9 Da

IEP (calculated)

8.954

GRAVY (calculated)

-0.393

Length

129 amino acids

Sequence
(BLAST)

001: MFLCLKFSET MAKSPFKLEH PLERRQAESA RIRDKYPDRI PVIVEKAERS DIPDIDKKKY LVPADLTVGQ FVYVVRKRIK VSAEKAIFVF VNNTLPPTAA
101: LMSSIYEENK DDDGFLYMTY SGENTFGSR

Best Arabidopsis Sequence Match ( AT4G21980.2 )
(BLAST)

001: MIFACLKFAE TNRIAMAKSS FKISNPLEAR MSESSRIREK YPDRIPVIVE KAGQSDVPDI DKKKYLVPAD LTVGQFVYVV RKRIKLGAEK AIFVFVKNTL
101: PPTAALMSAI YEEHKDEDGF LYMTYSGENT FGSLTVA

Arabidopsis Description

APG8AAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A8MS84]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.