CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77376	Soybean	cytosol	79.22	99.19
Solyc08g007400.2.1	Tomato	cytosol	72.08	93.28
PGSC0003DMT400032488	Potato	cytosol	73.38	92.62
KRH04111	Soybean	cytosol	76.62	92.19
CDY68526	Canola	cytosol	70.13	91.53
Bra040738.1-P	Field mustard	cytosol	70.13	91.53
PGSC0003DMT400012239	Potato	cytosol	71.43	90.16
CDY40540	Canola	cytosol	68.83	89.08
KRH57384	Soybean	cytosol	76.62	88.06
VIT_02s0154g00390.t01	Wine grape	cytosol	73.38	86.92
Bra012710.1-P	Field mustard	cytosol	66.88	86.55
Bra038481.1-P	Field mustard	cytosol, mitochondrion	44.16	82.93
CDX83397	Canola	cytosol	64.94	81.97
Bra000376.1-P	Field mustard	cytosol	64.94	81.97
CDX95634	Canola	cytosol	64.29	81.15
CDY56249	Canola	cytosol	64.29	81.15
AT3G60640.1	Thale cress	cytosol	63.64	80.99
KRH25368	Soybean	cytosol	62.99	80.83
KRH11438	Soybean	cytosol, mitochondrion	62.34	80.67
KRH36460	Soybean	cytosol, mitochondrion	62.34	80.67
Bra003310.1-P	Field mustard	cytosol	63.64	80.33
KRH56143	Soybean	cytosol	62.34	80.0
AT2G45170.1	Thale cress	cytosol	62.99	79.51
CDY32262	Canola	cytosol	61.69	77.87
KRH51096	Soybean	cytosol	62.34	74.42
KRH02062	Soybean	cytosol	61.69	73.64
GSMUA_Achr8P11170_001	Banana	cytosol	59.09	73.39
KRH12706	Soybean	cytosol	33.12	69.86
AT4G16520.3	Thale cress	extracellular	53.9	68.59
CDY37030	Canola	cytosol	35.71	65.48
GSMUA_Achr11P...	Banana	cytosol	50.0	62.1
CDX90515	Canola	plastid	68.18	57.38
CDY09685	Canola	plastid	68.83	57.3
Solyc08g078820.2.1	Tomato	cytosol, plastid	72.08	56.06
KRH69161	Soybean	cytosol	38.96	49.18
KRH31741	Soybean	cytosol	38.31	48.36
CDY50852	Canola	cytosol	70.13	37.76

Protein Annotations

EntrezGene:100781703	MapMan:19.3.3.1	Gene3D:3.10.20.90	EMBL:ACUP02006739	InterPro:Atg8-like	EnsemblPlantsGene:GLYMA_11G031800
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006914	GO:GO:0006950
GO:GO:0006995	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605
GO:GO:0009987	GO:GO:0009991	UniProt:I1LGN7	EnsemblPlants:KRH28060	ProteinID:KRH28060	ProteinID:KRH28060.1
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF39	SUPFAM:SSF54236	UniParc:UPI00023CDDA8	InterPro:Ubiquitin-like_domsf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:2331127..2333713

Molecular Weight (calculated)

17714.6 Da

IEP (calculated)

5.985

GRAVY (calculated)

-0.033

Length

154 amino acids

Sequence
(BLAST)

001: MARSYFKQEH DLGIYVLPFT PISNYLELLF CELNIIQIII MSAEKRRAEA ARIREKYPDR IPVIVEKAER SDIPSIDKKK YLVPADLTVG QFVYVIRKRI
101: KLSAEKAIFI FVDNVLPPTG AIMSAIYDEK KDEDGFLYVT YSGENTFGDL ISIQ

Best Arabidopsis Sequence Match ( AT2G45170.1 )
(BLAST)

001: MNKGSIFKMD NDFEKRKAEA GRIREKYPDR IPVIVEKAEK SEVPNIDKKK YLVPSDLTVG QFVYVIRKRI KLSAEKAIFI FVDNVLPPTG ELMSSVYEDK
101: KDEDGFLYIT YSGENTFGAS SI

Arabidopsis Description

ATG8EAutophagy-related protein 8e [Source:UniProtKB/Swiss-Prot;Acc:Q8S926]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.