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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
PTS1:peroxisome
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000376.1-P Field mustard cytosol 100.0 100.0
CDX95634 Canola cytosol 99.18 99.18
CDY56249 Canola cytosol 97.54 97.54
AT2G45170.1 Thale cress cytosol 93.44 93.44
CDY40540 Canola cytosol 83.61 85.71
CDY68526 Canola cytosol 82.79 85.59
Solyc08g007400.2.1 Tomato cytosol 82.79 84.87
PGSC0003DMT400032488 Potato cytosol 83.61 83.61
PGSC0003DMT400012239 Potato cytosol 82.79 82.79
KRH77376 Soybean cytosol 81.15 80.49
VIT_15s0048g00660.t01 Wine grape cytosol 80.33 79.03
KRH04111 Soybean cytosol 82.79 78.91
VIT_02s0154g00390.t01 Wine grape cytosol 83.61 78.46
CDX93087 Canola cytosol 74.59 76.47
CDY50946 Canola cytosol 73.77 75.63
CDY32262 Canola cytosol 75.41 75.41
KRH57384 Soybean cytosol 81.97 74.63
CDY16657 Canola cytosol 72.95 74.17
CDX94567 Canola cytosol 72.95 74.17
CDY37030 Canola cytosol 50.82 73.81
CDX79116 Canola cytosol 72.13 72.13
CDX82891 Canola cytosol 72.13 72.13
CDX98722 Canola cytosol 72.95 71.77
CDY07250 Canola cytosol 69.67 71.43
GSMUA_Achr8P11170_001 Banana cytosol 71.31 70.16
CDX82890 Canola cytosol 70.49 69.35
CDX94071 Canola cytosol 72.95 64.96
KRH28060 Soybean cytosol 81.97 64.94
CDY24873 Canola cytosol 49.18 63.83
GSMUA_Achr11P... Banana cytosol 60.66 59.68
CDX90515 Canola plastid 82.79 55.19
CDY09685 Canola plastid 81.97 54.05
CDY30087 Canola cytosol 50.82 53.91
CDX97685 Canola cytosol 50.82 53.91
CDY31453 Canola cytosol 58.2 52.59
Solyc08g078820.2.1 Tomato cytosol, plastid 82.79 51.01
CDY24693 Canola cytosol 46.72 47.9
CDY05263 Canola cytosol 46.72 47.9
CDX74104 Canola cytosol 46.72 47.9
CDY08051 Canola cytosol 45.9 47.06
CDY50852 Canola cytosol 82.79 35.31
Protein Annotations
EnsemblPlants:CDX83397EnsemblPlantsGene:GSBRNA2T00138965001Gene3D:3.10.20.90GO:A0A078D2P0InterPro:Atg8-likeInterPro:Ubiquitin-like_domsf
PANTHER:PTHR10969PANTHER:PTHR10969:SF39PFAM:PF02991ProteinID:CDX83397ProteinID:CDX83397.1SUPFAM:SSF54236
UniParc:UPI000253FE38MapMan:19.3.3.1::::
Description
BnaA03g21090D
Coordinates
chrLK031832:-:1381915..1383111
Molecular Weight (calculated)
13932.7 Da
IEP (calculated)
9.217
GRAVY (calculated)
-0.515
Length
122 amino acids
Sequence
(BLAST)
001: MNKGSSFKLD NDYEKRKAEA GRIREKYPDR IPVIVEKAEK SDIPNIDKKK YLVPSDLTVG QFVYVIRKRI KLSAEKAIFI FVDNVLPPTG EIMSSVYEEK
101: KDQDGFLYIT YSGENTFGAS SI
Best Arabidopsis Sequence Match ( AT2G45170.2 )
(BLAST)
001: MNKGSIFKMD NDFEKRKAEA GRIREKYPDR IPVIVEKAEK SEVPNIDKKK YLVPSDLTVG QFVYVIRKRI KLSAEKAIFI FVDNVLPPTG ELMSSVYEDK
101: KDEDGFLYIT YSGENTFGAS SI
Arabidopsis Description
ATG8EAutophagy-related protein 8e [Source:UniProtKB/Swiss-Prot;Acc:Q8S926]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.