Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68526 | Canola | cytosol | 83.87 | 88.14 |
| Bra040738.1-P | Field mustard | cytosol | 83.87 | 88.14 |
| VIT_02s0154g00390.t01 | Wine grape | cytosol | 91.94 | 87.69 |
| CDY40540 | Canola | cytosol | 83.06 | 86.55 |
| VIT_19s0090g00580.t01 | Wine grape | cytosol | 80.65 | 84.03 |
| Bra012710.1-P | Field mustard | cytosol | 80.65 | 84.03 |
| Bra038481.1-P | Field mustard | cytosol, mitochondrion | 54.84 | 82.93 |
| Bra000376.1-P | Field mustard | cytosol | 79.03 | 80.33 |
| CDX83397 | Canola | cytosol | 79.03 | 80.33 |
| CDY56249 | Canola | cytosol | 78.23 | 79.51 |
| CDX95634 | Canola | cytosol | 78.23 | 79.51 |
| AT3G60640.1 | Thale cress | cytosol | 77.42 | 79.34 |
| Bra003310.1-P | Field mustard | cytosol | 77.42 | 78.69 |
| VIT_10s0116g01700.t01 | Wine grape | cytosol | 77.42 | 78.69 |
| AT2G45170.1 | Thale cress | cytosol | 76.61 | 77.87 |
| VIT_12s0059g00660.t01 | Wine grape | cytosol | 75.81 | 77.69 |
| CDY32262 | Canola | cytosol | 74.19 | 75.41 |
| GSMUA_Achr8P11170_001 | Banana | cytosol | 72.58 | 72.58 |
| AT4G16520.3 | Thale cress | extracellular | 66.94 | 68.59 |
| GSMUA_Achr11P... | Banana | cytosol | 64.52 | 64.52 |
| CDY37030 | Canola | cytosol | 41.94 | 61.9 |
| CDX90515 | Canola | plastid | 82.26 | 55.74 |
| CDY09685 | Canola | plastid | 83.06 | 55.68 |
| VIT_07s0005g02200.t01 | Wine grape | cytosol | 45.97 | 45.97 |
| CDY50852 | Canola | cytosol | 83.87 | 36.36 |
Protein Annotations
| EntrezGene:100264435 | wikigene:100264435 | MapMan:19.3.3.1 | Gene3D:3.10.20.90 | InterPro:Atg8-like | ProteinID:CBI38875 |
| ProteinID:CBI38875.3 | UniProt:D7U7U6 | EMBL:FN596739 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006914 | GO:GO:0006950 | GO:GO:0006995 | GO:GO:0007154 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | EntrezGene:LOC100264435 |
| wikigene:LOC100264435 | PFAM:PF02991 | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF39 | SUPFAM:SSF54236 | TIGR:TC56959 |
| TIGR:TC68626 | UniParc:UPI00015CA399 | InterPro:Ubiquitin-like_domsf | ArrayExpress:VIT_15s0048g00660 | EnsemblPlantsGene:VIT_15s0048g00660 | EnsemblPlants:VIT_15s0048g00660.t01 |
| RefSeq:XP_002280060 | RefSeq:XP_002280060.1 | RefSeq:XP_002280077 | RefSeq:XP_002280077.1 | : | : |
Description
Autophagy-related protein [Source:UniProtKB/TrEMBL;Acc:D7U7U6]
Coordinates
chr15:-:14785251..14791252
Molecular Weight (calculated)
14339.3 Da
IEP (calculated)
9.473
GRAVY (calculated)
-0.410
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSYFKQEH EFEKRRAEAA RIRDKYPERI PVIVEKAERS DIPNIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPTGA IMSAIYDEKK
101: DADGFLYVTY SGENTFGYQI SPQL
101: DADGFLYVTY SGENTFGYQI SPQL
001: MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK
101: DDDGFLYVTY SGENTFGFGS P
101: DDDGFLYVTY SGENTFGFGS P
Arabidopsis Description
ATG8FUbiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.