Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25368 | Soybean | cytosol | 91.74 | 92.5 |
| GSMUA_Achr4P21280_001 | Banana | cytosol | 90.91 | 92.44 |
| KRH56143 | Soybean | cytosol | 90.91 | 91.67 |
| GSMUA_Achr10P... | Banana | cytosol | 89.26 | 90.76 |
| GSMUA_Achr2P12710_001 | Banana | cytosol | 89.26 | 90.76 |
| VIT_19s0090g00580.t01 | Wine grape | cytosol | 89.26 | 90.76 |
| Bra013172.1-P | Field mustard | cytosol | 86.78 | 88.24 |
| CDX93087 | Canola | cytosol | 86.78 | 88.24 |
| CDY50946 | Canola | cytosol | 85.95 | 87.39 |
| Solyc03g031650.2.1 | Tomato | cytosol | 87.6 | 86.18 |
| PGSC0003DMT400013025 | Potato | cytosol | 86.78 | 85.37 |
| VIT_10s0116g01700.t01 | Wine grape | cytosol | 80.99 | 80.33 |
| VIT_15s0048g00660.t01 | Wine grape | cytosol | 77.69 | 75.81 |
| VIT_02s0154g00390.t01 | Wine grape | cytosol | 77.69 | 72.31 |
| AT2G05630.2 | Thale cress | cytosol | 86.78 | 64.02 |
| VIT_07s0005g02200.t01 | Wine grape | cytosol | 52.89 | 51.61 |
Protein Annotations
| EntrezGene:100258507 | wikigene:100258507 | MapMan:19.3.3.1 | Gene3D:3.10.20.90 | InterPro:Atg8-like | ProteinID:CBI28802 |
| ProteinID:CBI28802.3 | UniProt:D7TE79 | EMBL:FN595765 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006914 | GO:GO:0006950 | GO:GO:0006995 | GO:GO:0007154 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | EntrezGene:LOC100258507 |
| wikigene:LOC100258507 | PFAM:PF02991 | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF43 | SUPFAM:SSF54236 | TIGR:TC57160 |
| TIGR:TC57971 | TIGR:TC60777 | UniParc:UPI00015CA9FC | InterPro:Ubiquitin-like_domsf | ArrayExpress:VIT_12s0059g00660 | EnsemblPlantsGene:VIT_12s0059g00660 |
| EnsemblPlants:VIT_12s0059g00660.t01 | RefSeq:XP_002268684 | RefSeq:XP_002268684.1 | SEG:seg | : | : |
Description
Autophagy-related protein [Source:UniProtKB/TrEMBL;Acc:D7TE79]
Coordinates
chr12:+:5491864..5494848
Molecular Weight (calculated)
14031.2 Da
IEP (calculated)
9.291
GRAVY (calculated)
-0.293
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKISFKMEH PLERRQAEAA RIREKYPDRI PVIVERAEKS DIPDIDKKKY LVPADLTVGQ FVYVVRKRIK LTPEKAIFIF IKNILPPTAA MMSAIYEENK
101: DEDGFLYMTY SGENTFGSLI M
101: DEDGFLYMTY SGENTFGSLI M
001: MAISSFKHEH PLEKRQAEAA RIREKYPDRI PVIVERAEKS DVPDIDRKKY LVPADLTVGQ FVYVVRKRIK LSPEKAIFIF VKNILPPTAA IMSAIYEEHK
101: DEDGFLYMSY SGENTFGIFF
101: DEDGFLYMSY SGENTFGIFF
Arabidopsis Description
ATG8DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:F4IHC1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.