Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013172.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY50946 | Canola | cytosol | 99.16 | 99.16 |
| KRH25368 | Soybean | cytosol | 91.6 | 90.83 |
| KRH56143 | Soybean | cytosol | 90.76 | 90.0 |
| GSMUA_Achr4P21280_001 | Banana | cytosol | 87.39 | 87.39 |
| VIT_12s0059g00660.t01 | Wine grape | cytosol | 88.24 | 86.78 |
| GSMUA_Achr2P12710_001 | Banana | cytosol | 86.55 | 86.55 |
| GSMUA_Achr10P... | Banana | cytosol | 85.71 | 85.71 |
| Solyc03g031650.2.1 | Tomato | cytosol | 86.55 | 83.74 |
| PGSC0003DMT400013025 | Potato | cytosol | 85.71 | 82.93 |
| CDY68526 | Canola | cytosol | 81.51 | 82.2 |
| CDY07250 | Canola | cytosol | 81.51 | 81.51 |
| CDY16657 | Canola | cytosol | 81.51 | 80.83 |
| CDX98722 | Canola | cytosol | 83.19 | 79.84 |
| CDY40540 | Canola | cytosol | 79.83 | 79.83 |
| CDX82891 | Canola | cytosol | 81.51 | 79.51 |
| CDX79116 | Canola | cytosol | 81.51 | 79.51 |
| CDX94567 | Canola | cytosol | 79.83 | 79.17 |
| CDX82890 | Canola | cytosol | 80.67 | 77.42 |
| CDY56249 | Canola | cytosol | 76.47 | 74.59 |
| CDX83397 | Canola | cytosol | 76.47 | 74.59 |
| CDX95634 | Canola | cytosol | 75.63 | 73.77 |
| CDX94071 | Canola | cytosol | 83.19 | 72.26 |
| CDY24873 | Canola | cytosol | 56.3 | 71.28 |
| CDY32262 | Canola | cytosol | 72.27 | 70.49 |
| AT2G05630.2 | Thale cress | cytosol | 95.8 | 69.51 |
| CDY37030 | Canola | cytosol | 42.86 | 60.71 |
| CDY31453 | Canola | cytosol | 67.23 | 59.26 |
| CDY30087 | Canola | cytosol | 57.14 | 59.13 |
| CDX97685 | Canola | cytosol | 57.14 | 59.13 |
| CDX74104 | Canola | cytosol | 52.1 | 52.1 |
| CDX90515 | Canola | plastid | 79.83 | 51.91 |
| CDY09685 | Canola | plastid | 80.67 | 51.89 |
| CDY08051 | Canola | cytosol | 51.26 | 51.26 |
| CDY05263 | Canola | cytosol | 48.74 | 48.74 |
| CDY24693 | Canola | cytosol | 47.9 | 47.9 |
| CDY50852 | Canola | cytosol | 81.51 | 33.92 |
Protein Annotations
| EnsemblPlants:CDX93087 | EnsemblPlantsGene:GSBRNA2T00154998001 | Gene3D:3.10.20.90 | GO:A0A078DW18 | InterPro:Atg8-like | InterPro:Ubiquitin-like_domsf |
| PANTHER:PTHR10969 | PANTHER:PTHR10969:SF43 | PFAM:PF02991 | ProteinID:CDX93087 | ProteinID:CDX93087.1 | SUPFAM:SSF54236 |
| UniParc:UPI000254097B | MapMan:19.3.3.1 | : | : | : | : |
Description
BnaA03g38090D
Coordinates
chrLK031874:-:1122909..1124381
Molecular Weight (calculated)
13725.6 Da
IEP (calculated)
8.794
GRAVY (calculated)
-0.334
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISSFKQEH PLEKRQAEAS RIRDKYPDRI PVIVERAEKS DVPDIDKKKY LVPADLTVGQ FVYVVRKRIK LSPEKAIFIF VKNILPPTAA IMSAIYEEHK
101: DEDGFLYMSY SGENTFGIF
101: DEDGFLYMSY SGENTFGIF
001: MAISSFKHEH PLEKRQAEAA RIREKYPDRI PVIVERAEKS DVPDIDRKKY LVPADLTVGQ FVYVVRKRIK LSPEKAIFIF VKNILPPTAA IMSAIYEEHK
101: DEDGFLYMSY SGENTFGIFF
101: DEDGFLYMSY SGENTFGIFF
Arabidopsis Description
ATG8DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:F4IHC1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.