CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001197.1-P	Field mustard	cytosol	99.16	99.16
CDX74104	Canola	cytosol	99.16	99.16
AT3G06420.1	Thale cress	cytosol	92.44	92.44
CDY05263	Canola	cytosol	88.24	88.24
CDY24693	Canola	cytosol	87.39	87.39
CDY30087	Canola	cytosol	68.91	71.3
CDX97685	Canola	cytosol	68.91	71.3
GSMUA_Achr5P27270_001	Banana	cytosol	68.07	68.07
VIT_07s0005g02200.t01	Wine grape	cytosol	70.59	67.74
KRH69161	Soybean	cytosol	67.23	65.57
KRH31741	Soybean	cytosol	67.23	65.57
Solyc01g068060.2.1	Tomato	cytosol	65.55	65.55
PGSC0003DMT400013320	Potato	cytosol	64.71	64.71
TraesCS5A01G158000.1	Wheat	plasma membrane	59.66	61.21
TraesCS5B01G155700.1	Wheat	cytosol	58.82	60.34
HORVU5Hr1G049440.1	Barley	cytosol	58.82	60.34
TraesCS5D01G163400.1	Wheat	cytosol	53.78	58.72
CDY07250	Canola	cytosol	53.78	53.78
CDY16657	Canola	cytosol	52.94	52.5
CDX94567	Canola	cytosol	52.1	51.67
CDX93087	Canola	cytosol	51.26	51.26
CDY50946	Canola	cytosol	51.26	51.26
CDX98722	Canola	cytosol	52.94	50.81
CDX79116	Canola	cytosol	51.26	50.0
CDX82891	Canola	cytosol	51.26	50.0
CDX82890	Canola	cytosol	51.26	49.19
CDY68526	Canola	cytosol	47.9	48.31
OQU75649	Sorghum	cytosol	44.54	47.75
CDY56249	Canola	cytosol	47.9	46.72
CDY40540	Canola	cytosol	46.22	46.22
CDX94071	Canola	cytosol	52.94	45.99
CDX83397	Canola	cytosol	47.06	45.9
CDX95634	Canola	cytosol	46.22	45.08
CDY32262	Canola	cytosol	43.7	42.62
CDY24873	Canola	cytosol	31.93	40.43
CDY37030	Canola	cytosol	27.73	39.29
CDY31453	Canola	cytosol	44.54	39.26
CDX90515	Canola	plastid	45.38	29.51
CDY09685	Canola	plastid	45.38	29.19
CDY50852	Canola	cytosol	47.9	19.93

Protein Annotations

MapMan:19.3.3.1	Gene3D:3.10.20.90	GO:A0A078F3Z6	UniProt:A0A078F3Z6	InterPro:Atg8-like	EnsemblPlants:CDY08051
ProteinID:CDY08051	ProteinID:CDY08051.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00125305001
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF25	SUPFAM:SSF54236	UniParc:UPI0004EF34D8	InterPro:Ubiquitin-like_domsf

Description

BnaC03g34720DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3Z6]

Coordinates

chrLK031982:+:874641..876094

Molecular Weight (calculated)

13741.5 Da

IEP (calculated)

6.533

GRAVY (calculated)

-0.358

Length

119 amino acids

Sequence
(BLAST)

001: MGIVVKSFKD QFSSDERLKE SSNIIAKYPD RVPVIIEKYS NADLPDMEKS KFLVPRDMTV GHFIHMLSNR LQLDPSKALF VFVQNTLPQT AARMDSLYNT
101: FKEEDGFLYM TYSTEKTFG

Best Arabidopsis Sequence Match ( AT3G06420.1 )
(BLAST)

001: MGIVVKSFKD QFSSDERLKE SNNIIAKYPD RIPVIIEKYS NADLPDMEKN KYLVPRDMTV GHFIHMLSKR MQLDPSKALF VFVHNTLPQT ASRMDSLYNT
101: FKEEDGFLYM CYSTEKTFG

Arabidopsis Description

ATG8HAutophagy-related protein 8h [Source:UniProtKB/Swiss-Prot;Acc:Q8S925]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.