CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68526	Canola	cytosol	94.96	95.76
Solyc08g007400.2.1	Tomato	cytosol	88.24	88.24
PGSC0003DMT400012239	Potato	cytosol	89.08	86.89
KRH77376	Soybean	cytosol	88.24	85.37
PGSC0003DMT400032488	Potato	cytosol	87.39	85.25
CDY32262	Canola	cytosol	86.55	84.43
CDX83397	Canola	cytosol	85.71	83.61
VIT_15s0048g00660.t01	Wine grape	cytosol	86.55	83.06
KRH04111	Soybean	cytosol	89.08	82.81
CDY56249	Canola	cytosol	84.87	82.79
CDX95634	Canola	cytosol	84.87	82.79
VIT_02s0154g00390.t01	Wine grape	cytosol	88.24	80.77
CDX93087	Canola	cytosol	79.83	79.83
KRH57384	Soybean	cytosol	89.08	79.1
CDY50946	Canola	cytosol	78.99	78.99
CDY16657	Canola	cytosol	76.47	75.83
CDX98722	Canola	cytosol	78.15	75.0
CDX94567	Canola	cytosol	75.63	75.0
CDY07250	Canola	cytosol	74.79	74.79
CDX82891	Canola	cytosol	75.63	73.77
CDX79116	Canola	cytosol	75.63	73.77
AT4G16520.3	Thale cress	extracellular	74.79	73.55
CDX82890	Canola	cytosol	73.95	70.97
KRH28060	Soybean	cytosol	89.08	68.83
GSMUA_Achr8P11170_001	Banana	cytosol	71.43	68.55
CDX94071	Canola	cytosol	78.15	67.88
CDY24873	Canola	cytosol	52.94	67.02
CDY37030	Canola	cytosol	45.38	64.29
CDX90515	Canola	plastid	96.64	62.84
CDY09685	Canola	plastid	95.8	61.62
GSMUA_Achr11P...	Banana	cytosol	61.34	58.87
CDY30087	Canola	cytosol	54.62	56.52
CDX97685	Canola	cytosol	54.62	56.52
CDY31453	Canola	cytosol	62.18	54.81
Solyc08g078820.2.1	Tomato	cytosol, plastid	89.92	54.04
CDX74104	Canola	cytosol	47.06	47.06
CDY24693	Canola	cytosol	46.22	46.22
CDY08051	Canola	cytosol	46.22	46.22
CDY05263	Canola	cytosol	46.22	46.22
CDY50852	Canola	cytosol	94.96	39.51

Protein Annotations

MapMan:19.3.3.1	Gene3D:3.10.20.90	GO:A0A078HPT5	UniProt:A0A078HPT5	InterPro:Atg8-like	EnsemblPlants:CDY40540
ProteinID:CDY40540	ProteinID:CDY40540.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00069859001
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF39	SUPFAM:SSF54236	UniParc:UPI0004EBE2AB	InterPro:Ubiquitin-like_domsf

Description

BnaC01g19720DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPT5]

Coordinates

chrLK032473:+:283128..284850

Molecular Weight (calculated)

13504.2 Da

IEP (calculated)

7.505

GRAVY (calculated)

-0.425

Length

119 amino acids

Sequence
(BLAST)

001: MAKSTFKEEH DLEKRSAEAA RIREKYPDRI PVIVEKGEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPTGA LMSAVYEEKK
101: DDDGFLYVTY SGENTFGSP

Best Arabidopsis Sequence Match ( AT4G16520.2 )
(BLAST)

001: MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK
101: DDDGFLYVTY SGENTFGFGS P

Arabidopsis Description

ATG8FUbiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.