CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77376	Soybean	cytosol	91.41	95.12
Solyc08g007400.2.1	Tomato	cytosol	88.28	94.96
PGSC0003DMT400032488	Potato	cytosol	89.84	94.26
KRH57384	Soybean	cytosol	98.44	94.03
Bra040738.1-P	Field mustard	cytosol	84.38	91.53
CDY68526	Canola	cytosol	84.38	91.53
PGSC0003DMT400012239	Potato	cytosol	86.72	90.98
CDY40540	Canola	cytosol	82.81	89.08
VIT_02s0154g00390.t01	Wine grape	cytosol	89.06	87.69
Bra012710.1-P	Field mustard	cytosol	80.47	86.55
Bra000376.1-P	Field mustard	cytosol	78.91	82.79
CDX83397	Canola	cytosol	78.91	82.79
CDX95634	Canola	cytosol	78.12	81.97
CDY56249	Canola	cytosol	78.12	81.97
AT3G60640.1	Thale cress	cytosol	77.34	81.82
Bra038481.1-P	Field mustard	cytosol, mitochondrion	52.34	81.71
Bra003310.1-P	Field mustard	cytosol	77.34	81.15
KRH25368	Soybean	cytosol	75.78	80.83
KRH36460	Soybean	cytosol, mitochondrion	75.0	80.67
KRH11438	Soybean	cytosol, mitochondrion	75.0	80.67
AT2G45170.1	Thale cress	cytosol	76.56	80.33
KRH56143	Soybean	cytosol	75.0	80.0
CDY32262	Canola	cytosol	73.44	77.05
KRH28060	Soybean	cytosol	92.19	76.62
KRH51096	Soybean	cytosol	76.56	75.97
KRH02062	Soybean	cytosol	75.78	75.19
GSMUA_Achr8P11170_001	Banana	cytosol	70.31	72.58
AT4G16520.3	Thale cress	extracellular	65.62	69.42
KRH12706	Soybean	cytosol	39.06	68.49
CDY37030	Canola	cytosol	42.97	65.48
GSMUA_Achr11P...	Banana	cytosol	59.38	61.29
CDX90515	Canola	plastid	82.03	57.38
CDY09685	Canola	plastid	82.81	57.3
Solyc08g078820.2.1	Tomato	cytosol, plastid	87.5	56.57
KRH69161	Soybean	cytosol	47.66	50.0
KRH31741	Soybean	cytosol	46.88	49.18
CDY50852	Canola	cytosol	84.38	37.76

Protein Annotations

EntrezGene:100499835	MapMan:19.3.3.1	Gene3D:3.10.20.90	EMBL:ACUP02010382	InterPro:Atg8-like	EnsemblPlantsGene:GLYMA_17G140700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006914	GO:GO:0006950
GO:GO:0006995	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605
GO:GO:0009987	GO:GO:0009991	UniProt:I1MUZ8	EnsemblPlants:KRH04111	ProteinID:KRH04111	ProteinID:KRH04111.1
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF39	SUPFAM:SSF54236	UniParc:UPI00023D60AA	InterPro:Ubiquitin-like_domsf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:11428662..11431171

Molecular Weight (calculated)

14729.8 Da

IEP (calculated)

9.236

GRAVY (calculated)

-0.416

Length

128 amino acids

Sequence
(BLAST)

001: MLIPGRMAKS YFKQEHDLEK RRAEAARIRE KYPDRIPVIV EKAERSDIPS IDKKKYLVPA DLTVGQFVYV IRKRIKLSAE KAIFIFVDNV LPPTGAIMSS
101: IYDEKKDEDG FLYVTYSGEN TFGDLTSH

Best Arabidopsis Sequence Match ( AT4G16520.2 )
(BLAST)

001: MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK
101: DDDGFLYVTY SGENTFGFGS P

Arabidopsis Description

ATG8FUbiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.