Factsheet for Bra038481.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G16520.3	Thale cress	extracellular	87.8	59.5
Bra040738.1-P	Field mustard	cytosol	85.37	59.32
CDY32262	Canola	cytosol	87.8	59.02
Bra012710.1-P	Field mustard	cytosol	84.15	57.98
Solyc08g007400.2.1	Tomato	cytosol	81.71	56.3
KRH77376	Soybean	cytosol	82.93	55.28
PGSC0003DMT400032488	Potato	cytosol	81.71	54.92
PGSC0003DMT400012239	Potato	cytosol	81.71	54.92
VIT_15s0048g00660.t01	Wine grape	cytosol	82.93	54.84
Bra000376.1-P	Field mustard	cytosol	80.49	54.1
Bra029509.1-P	Field mustard	cytosol	78.05	53.33
Bra003310.1-P	Field mustard	cytosol	79.27	53.28
KRH04111	Soybean	cytosol	81.71	52.34
Bra013578.1-P	Field mustard	cytosol	76.83	51.64
Bra019407.1-P	Field mustard	cytosol	78.05	51.61
VIT_02s0154g00390.t01	Wine grape	cytosol	81.71	51.54
KRH57384	Soybean	cytosol	82.93	50.75
Bra013172.1-P	Field mustard	cytosol	73.17	50.42
GSMUA_Achr8P11170_001	Banana	cytosol	70.73	46.77
Bra021303.1-P	Field mustard	cytosol	46.34	45.78
KRH28060	Soybean	cytosol	82.93	44.16
GSMUA_Achr11P...	Banana	cytosol	60.98	40.32
Bra027227.1-P	Field mustard	cytosol	50.0	35.65
Solyc08g078820.2.1	Tomato	cytosol, plastid	82.93	34.34
Bra001197.1-P	Field mustard	cytosol	45.12	31.09
Bra020749.1-P	Field mustard	cytosol	43.9	30.25

Protein Annotations

EnsemblPlants:Bra038481.1	EnsemblPlants:Bra038481.1-P	EnsemblPlantsGene:Bra038481	Gene3D:3.10.20.90	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	InterPro:Atg8-like	InterPro:Ubiquitin-like_domsf	PANTHER:PTHR10969	PANTHER:PTHR10969:SF39	PFAM:PF02991
SUPFAM:SSF54236	UniParc:UPI0002544504	UniProt:M4FBL5	MapMan:19.3.3.1	:	:

Description

AT4G16520 (E=2e-033) ATG8F | ATG8F (autophagy 8f); microtubule binding

Coordinates

chrA01:+:10944374..10944947

Molecular Weight (calculated)

9222.2 Da

IEP (calculated)

8.432

GRAVY (calculated)

0.038

Length

82 amino acids

Sequence
(BLAST)

1: MIVSKRCQPQ KLYLVPADLT VGQFVYVIRK RIKLSAEKAI FIFVDNVLPP TGALMSAVYE EKKDDDGFLY VTYSGENTFG SP

Best Arabidopsis Sequence Match ( AT4G16520.1 )
(BLAST)

001: MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK
101: DDDGFLYVTY SGENTFGFGS P

Arabidopsis Description

ATG8FUbiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.