Factsheet for Bra012710.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040738.1-P	Field mustard	cytosol	92.44	93.22
Solyc08g007400.2.1	Tomato	cytosol	85.71	85.71
PGSC0003DMT400012239	Potato	cytosol	87.39	85.25
Bra038481.1-P	Field mustard	cytosol, mitochondrion	57.98	84.15
PGSC0003DMT400032488	Potato	cytosol	85.71	83.61
KRH77376	Soybean	cytosol	85.71	82.93
Bra000376.1-P	Field mustard	cytosol	83.19	81.15
VIT_15s0048g00660.t01	Wine grape	cytosol	84.03	80.65
KRH04111	Soybean	cytosol	86.55	80.47
Bra003310.1-P	Field mustard	cytosol	81.51	79.51
VIT_02s0154g00390.t01	Wine grape	cytosol	85.71	78.46
Bra013172.1-P	Field mustard	cytosol	78.15	78.15
KRH57384	Soybean	cytosol	86.55	76.87
Bra029509.1-P	Field mustard	cytosol	75.63	75.0
Bra019407.1-P	Field mustard	cytosol	76.47	73.39
Bra013578.1-P	Field mustard	cytosol	73.95	72.13
AT4G16520.3	Thale cress	extracellular	73.11	71.9
Bra021303.1-P	Field mustard	cytosol	49.58	71.08
KRH28060	Soybean	cytosol	86.55	66.88
GSMUA_Achr8P11170_001	Banana	cytosol	68.91	66.13
CDX90515	Canola	plastid	98.32	63.93
CDY09685	Canola	plastid	96.64	62.16
GSMUA_Achr11P...	Banana	cytosol	59.66	57.26
Bra027227.1-P	Field mustard	cytosol	52.94	54.78
Solyc08g078820.2.1	Tomato	cytosol, plastid	88.24	53.03
Bra001197.1-P	Field mustard	cytosol	46.22	46.22
Bra020749.1-P	Field mustard	cytosol	45.38	45.38

Protein Annotations

EnsemblPlants:Bra012710.1	EnsemblPlants:Bra012710.1-P	EnsemblPlantsGene:Bra012710	Gene3D:3.10.20.90	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	InterPro:Atg8-like	InterPro:Ubiquitin-like_domsf	PANTHER:PTHR10969	PANTHER:PTHR10969:SF39	PFAM:PF02991
SUPFAM:SSF54236	UniParc:UPI00025408BF	UniProt:M4D8A0	MapMan:19.3.3.1	:	:

Description

AT4G16520 (E=8e-058) ATG8F | ATG8F (autophagy 8f); microtubule binding

Coordinates

chrA03:-:22608368..22609202

Molecular Weight (calculated)

13578.3 Da

IEP (calculated)

7.659

GRAVY (calculated)

-0.434

Length

119 amino acids

Sequence
(BLAST)

001: MAKSTFKEEH DLEKRSAEAA RIREKYSDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LNSEKAIFIF VDNVLPPTGA LMSAVYEEKK
101: DDDGFLYVTY SGEHTFGST

Best Arabidopsis Sequence Match ( AT4G16520.2 )
(BLAST)

001: MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK
101: DDDGFLYVTY SGENTFGFGS P

Arabidopsis Description

ATG8FUbiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.