CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012710.1-P	Field mustard	cytosol	62.16	96.64
CDX90515	Canola	plastid	95.14	96.17
CDY40540	Canola	cytosol	61.62	95.8
CDY68526	Canola	cytosol	60.54	94.92
PGSC0003DMT400012239	Potato	cytosol	57.84	87.7
Solyc08g007400.2.1	Tomato	cytosol	56.22	87.39
KRH77376	Soybean	cytosol	56.76	85.37
PGSC0003DMT400032488	Potato	cytosol	56.22	85.25
VIT_15s0048g00660.t01	Wine grape	cytosol	55.68	83.06
KRH04111	Soybean	cytosol	57.3	82.81
CDX95634	Canola	cytosol	54.05	81.97
CDX83397	Canola	cytosol	54.05	81.97
CDY32262	Canola	cytosol	54.05	81.97
VIT_02s0154g00390.t01	Wine grape	cytosol	57.3	81.54
CDY56249	Canola	cytosol	53.51	81.15
CDX93087	Canola	cytosol	51.89	80.67
KRH57384	Soybean	cytosol	58.38	80.6
CDY50946	Canola	cytosol	51.35	79.83
CDY16657	Canola	cytosol	49.19	75.83
CDX94567	Canola	cytosol	48.65	75.0
CDX98722	Canola	cytosol	49.73	74.19
CDY07250	Canola	cytosol	47.57	73.95
CDX79116	Canola	cytosol	48.65	73.77
CDX82891	Canola	cytosol	48.65	73.77
AT4G16520.3	Thale cress	extracellular	48.11	73.55
CDX82890	Canola	cytosol	47.57	70.97
KRH28060	Soybean	cytosol	57.3	68.83
CDX94071	Canola	cytosol	50.27	67.88
GSMUA_Achr8P11170_001	Banana	cytosol	45.41	67.74
CDY24873	Canola	cytosol	33.51	65.96
CDY37030	Canola	cytosol	29.19	64.29
Solyc08g078820.2.1	Tomato	cytosol, plastid	66.49	62.12
GSMUA_Achr11P...	Banana	cytosol	38.92	58.06
CDY30087	Canola	cytosol	34.59	55.65
CDX97685	Canola	cytosol	34.59	55.65
CDY31453	Canola	cytosol	40.0	54.81
CDY50852	Canola	cytosol	71.89	46.5
CDY24693	Canola	cytosol	29.73	46.22
CDX74104	Canola	cytosol	29.73	46.22
CDY08051	Canola	cytosol	29.19	45.38
CDY05263	Canola	cytosol	29.19	45.38

Protein Annotations

MapMan:19.3.3.1	Gene3D:3.10.20.90	GO:A0A078F5F7	UniProt:A0A078F5F7	InterPro:Atg8-like	EnsemblPlants:CDY09685
ProteinID:CDY09685	ProteinID:CDY09685.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00031353001
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF39	SUPFAM:SSF54236	UniParc:UPI0004EE9DF7	InterPro:Ubiquitin-like_domsf

Description

BnaC07g33760DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5F7]

Coordinates

chrLK031998:+:444067..445664

Molecular Weight (calculated)

20900.2 Da

IEP (calculated)

8.174

GRAVY (calculated)

-0.167

Length

185 amino acids

Sequence
(BLAST)

001: MQQRDPVICG ASSLSFFVPS DSHRFSRSKV PRQLRSLDAI MLSLYAIPCL ITNIQTYLEV GVEVMAKSTF KEEHDLEKRS AEAARIREKY SDRIPVIVEK
101: AEKSDIPTID KKKYLVPADL TVGQFVYVIR KRIKLSSEKA IFIFVDNVLP PTGALMSAVY EEKKDDDGFL YVTYSGENTF GFASS

Best Arabidopsis Sequence Match ( AT4G16520.2 )
(BLAST)

001: MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK
101: DDDGFLYVTY SGENTFGFGS P

Arabidopsis Description

ATG8FUbiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.