CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040738.1-P	Field mustard	cytosol	100.0	100.0
CDY40540	Canola	cytosol	95.76	94.96
Solyc08g007400.2.1	Tomato	cytosol	89.83	89.08
KRH77376	Soybean	cytosol	90.68	86.99
PGSC0003DMT400032488	Potato	cytosol	89.83	86.89
PGSC0003DMT400012239	Potato	cytosol	89.83	86.89
KRH04111	Soybean	cytosol	91.53	84.38
VIT_15s0048g00660.t01	Wine grape	cytosol	88.14	83.87
CDX83397	Canola	cytosol	85.59	82.79
VIT_02s0154g00390.t01	Wine grape	cytosol	90.68	82.31
CDY56249	Canola	cytosol	84.75	81.97
CDX95634	Canola	cytosol	84.75	81.97
CDY32262	Canola	cytosol	84.75	81.97
CDX93087	Canola	cytosol	82.2	81.51
CDY50946	Canola	cytosol	81.36	80.67
KRH57384	Soybean	cytosol	91.53	80.6
CDY16657	Canola	cytosol	77.97	76.67
CDX94567	Canola	cytosol	77.12	75.83
CDX98722	Canola	cytosol	79.66	75.81
CDY07250	Canola	cytosol	76.27	75.63
CDX79116	Canola	cytosol	77.12	74.59
CDX82891	Canola	cytosol	77.12	74.59
AT4G16520.3	Thale cress	extracellular	74.58	72.73
CDX82890	Canola	cytosol	75.42	71.77
GSMUA_Achr8P11170_001	Banana	cytosol	73.73	70.16
KRH28060	Soybean	cytosol	91.53	70.13
CDX94071	Canola	cytosol	79.66	68.61
CDY24873	Canola	cytosol	54.24	68.09
CDY37030	Canola	cytosol	45.76	64.29
CDX90515	Canola	plastid	94.92	61.2
CDY09685	Canola	plastid	94.92	60.54
GSMUA_Achr11P...	Banana	cytosol	63.56	60.48
CDY30087	Canola	cytosol	54.24	55.65
CDX97685	Canola	cytosol	54.24	55.65
CDY31453	Canola	cytosol	63.56	55.56
Solyc08g078820.2.1	Tomato	cytosol, plastid	90.68	54.04
CDX74104	Canola	cytosol	49.15	48.74
CDY08051	Canola	cytosol	48.31	47.9
CDY24693	Canola	cytosol	47.46	47.06
CDY05263	Canola	cytosol	47.46	47.06
CDY50852	Canola	cytosol	100.0	41.26

Protein Annotations

MapMan:19.3.3.1	Gene3D:3.10.20.90	GO:A0A078JSA5	UniProt:A0A078JSA5	InterPro:Atg8-like	EnsemblPlants:CDY68526
ProteinID:CDY68526	ProteinID:CDY68526.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00075379001
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF39	SUPFAM:SSF54236	UniParc:UPI000253E861	InterPro:Ubiquitin-like_domsf

Description

BnaAnng27580DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSA5]

Coordinates

chrLK037488:+:890..2225

Molecular Weight (calculated)

13524.3 Da

IEP (calculated)

8.748

GRAVY (calculated)

-0.401

Length

118 amino acids

Sequence
(BLAST)

001: MAKSTFKQEH DLEKRSAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPTGA LMSAVYEEKK
101: EEDGFLYVTY SGENTFGY

Best Arabidopsis Sequence Match ( AT4G16520.2 )
(BLAST)

001: MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK
101: DDDGFLYVTY SGENTFGFGS P

Arabidopsis Description

ATG8FUbiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.