Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98722 | Canola | cytosol | 68.89 | 75.0 |
| CDX79116 | Canola | cytosol | 65.93 | 72.95 |
| CDX82891 | Canola | cytosol | 65.93 | 72.95 |
| CDY16657 | Canola | cytosol | 64.44 | 72.5 |
| CDX94567 | Canola | cytosol | 62.96 | 70.83 |
| KRH11438 | Soybean | cytosol, mitochondrion | 62.22 | 70.59 |
| KRH36460 | Soybean | cytosol, mitochondrion | 62.22 | 70.59 |
| CDX82890 | Canola | cytosol | 64.44 | 70.16 |
| GSMUA_Achr5P02890_001 | Banana | cytosol | 60.74 | 68.91 |
| CDX94071 | Canola | cytosol | 68.89 | 67.88 |
| CDX93087 | Canola | cytosol | 59.26 | 67.23 |
| CDY50946 | Canola | cytosol | 58.52 | 66.39 |
| AT4G21980.2 | Thale cress | cytosol | 66.67 | 65.69 |
| KRH51096 | Soybean | cytosol | 60.74 | 63.57 |
| CDY68526 | Canola | cytosol | 55.56 | 63.56 |
| KRH02062 | Soybean | cytosol | 60.0 | 62.79 |
| CDY07250 | Canola | cytosol | 54.81 | 62.18 |
| CDY40540 | Canola | cytosol | 54.81 | 62.18 |
| CDX83397 | Canola | cytosol | 52.59 | 58.2 |
| CDY56249 | Canola | cytosol | 52.59 | 58.2 |
| CDX95634 | Canola | cytosol | 51.85 | 57.38 |
| CDY24873 | Canola | cytosol | 39.26 | 56.38 |
| CDY32262 | Canola | cytosol | 48.89 | 54.1 |
| CDX97685 | Canola | cytosol | 43.7 | 51.3 |
| CDY30087 | Canola | cytosol | 43.7 | 51.3 |
| CDX74104 | Canola | cytosol | 40.0 | 45.38 |
| CDY05263 | Canola | cytosol | 40.0 | 45.38 |
| CDY24693 | Canola | cytosol | 39.26 | 44.54 |
| CDY08051 | Canola | cytosol | 39.26 | 44.54 |
| CDX90515 | Canola | plastid | 54.81 | 40.44 |
| CDY09685 | Canola | plastid | 54.81 | 40.0 |
| CDY37030 | Canola | cytosol | 24.44 | 39.29 |
| CDY50852 | Canola | cytosol | 55.56 | 26.22 |
Protein Annotations
| MapMan:19.3.3.1 | Gene3D:3.10.20.90 | GO:A0A078H3P4 | UniProt:A0A078H3P4 | InterPro:Atg8-like | EnsemblPlants:CDY31453 |
| ProteinID:CDY31453 | ProteinID:CDY31453.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006914 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00047700001 |
| PFAM:PF02991 | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF47 | SUPFAM:SSF54236 | UniParc:UPI0004EDE53D | InterPro:Ubiquitin-like_domsf |
Description
BnaC03g63710DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3P4]
Coordinates
chrLK032272:-:344963..346201
Molecular Weight (calculated)
15482.9 Da
IEP (calculated)
9.362
GRAVY (calculated)
-0.245
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFACLKFAD SNIIAKAKSS FKLSSPLEAR MGEATRMREK YPDRIPVIME KAGQSDLPDI DKNKYLVPAD LTVGQFKYVV RKRVKPGAEI LVFVNNTLIP
101: PNAALMSAIY EKHKDEDGLL YMTYCGDREH FWFFR
101: PNAALMSAIY EKHKDEDGLL YMTYCGDREH FWFFR
001: MEKNSFKLSN PLEMRMAEST RIRAKYPERV PVIVEKAGQS DVPDIDKKKY LVPADLTIGQ FVYVVRKRIK LGAEKAIFVF VKNTLPPTAA LMSAIYEEHK
101: DEDGFLYMTY SGENTFGGSF YC
101: DEDGFLYMTY SGENTFGGSF YC
Arabidopsis Description
ATG8BAutophagy-related protein 8b [Source:UniProtKB/Swiss-Prot;Acc:Q9XEB5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.