CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000376.1-P	Field mustard	cytosol	99.18	99.18
CDX83397	Canola	cytosol	99.18	99.18
CDY56249	Canola	cytosol	96.72	96.72
AT2G45170.1	Thale cress	cytosol	92.62	92.62
Solyc08g007400.2.1	Tomato	cytosol	82.79	84.87
CDY40540	Canola	cytosol	82.79	84.87
CDY68526	Canola	cytosol	81.97	84.75
PGSC0003DMT400032488	Potato	cytosol	83.61	83.61
PGSC0003DMT400012239	Potato	cytosol	83.61	83.61
KRH77376	Soybean	cytosol	80.33	79.67
VIT_15s0048g00660.t01	Wine grape	cytosol	79.51	78.23
KRH04111	Soybean	cytosol	81.97	78.12
VIT_02s0154g00390.t01	Wine grape	cytosol	82.79	77.69
CDX93087	Canola	cytosol	73.77	75.63
CDY50946	Canola	cytosol	72.95	74.79
CDY32262	Canola	cytosol	74.59	74.59
CDY16657	Canola	cytosol	72.95	74.17
CDX94567	Canola	cytosol	72.95	74.17
KRH57384	Soybean	cytosol	81.15	73.88
CDY37030	Canola	cytosol	50.0	72.62
CDX79116	Canola	cytosol	71.31	71.31
CDX82891	Canola	cytosol	71.31	71.31
CDX98722	Canola	cytosol	72.13	70.97
CDY07250	Canola	cytosol	68.85	70.59
GSMUA_Achr8P11170_001	Banana	cytosol	70.49	69.35
CDX82890	Canola	cytosol	69.67	68.55
KRH28060	Soybean	cytosol	81.15	64.29
CDX94071	Canola	cytosol	72.13	64.23
CDY24873	Canola	cytosol	48.36	62.77
GSMUA_Achr11P...	Banana	cytosol	59.84	58.87
CDX90515	Canola	plastid	82.79	55.19
CDY09685	Canola	plastid	81.97	54.05
CDY30087	Canola	cytosol	50.0	53.04
CDX97685	Canola	cytosol	50.0	53.04
CDY31453	Canola	cytosol	57.38	51.85
Solyc08g078820.2.1	Tomato	cytosol, plastid	83.61	51.52
CDY24693	Canola	cytosol	45.9	47.06
CDY05263	Canola	cytosol	45.9	47.06
CDX74104	Canola	cytosol	45.9	47.06
CDY08051	Canola	cytosol	45.08	46.22
CDY50852	Canola	cytosol	81.97	34.97

Protein Annotations

EnsemblPlants:CDX95634	EnsemblPlantsGene:GSBRNA2T00101514001	Gene3D:3.10.20.90	GO:A0A078E527	InterPro:Atg8-like	InterPro:Ubiquitin-like_domsf
PANTHER:PTHR10969	PANTHER:PTHR10969:SF39	PFAM:PF02991	ProteinID:CDX95634	ProteinID:CDX95634.1	SUPFAM:SSF54236
UniParc:UPI0004EDB0F7	MapMan:19.3.3.1	:	:	:	:

Description

BnaC03g25150D

Coordinates

chrLK031890:+:369331..370556

Molecular Weight (calculated)

13906.7 Da

IEP (calculated)

9.217

GRAVY (calculated)

-0.487

Length

122 amino acids

Sequence
(BLAST)

001: MNKGSSFKLD NDYEKRKAEA GRIREKYADR IPVIVEKAEK SDIPNIDKKK YLVPSDLTVG QFVYVIRKRI KLSAEKAIFI FVDNVLPPTG EIMSSVYEEK
101: KDQDGFLYIT YSGENTFGAS SI

Best Arabidopsis Sequence Match ( AT2G45170.2 )
(BLAST)

001: MNKGSIFKMD NDFEKRKAEA GRIREKYPDR IPVIVEKAEK SEVPNIDKKK YLVPSDLTVG QFVYVIRKRI KLSAEKAIFI FVDNVLPPTG ELMSSVYEDK
101: KDEDGFLYIT YSGENTFGAS SI

Arabidopsis Description

ATG8EAutophagy-related protein 8e [Source:UniProtKB/Swiss-Prot;Acc:Q8S926]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.