CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040738.1-P	Field mustard	cytosol	41.26	100.0
CDY68526	Canola	cytosol	41.26	100.0
CDY40540	Canola	cytosol	39.51	94.96
Solyc08g007400.2.1	Tomato	cytosol	37.06	89.08
KRH77376	Soybean	cytosol	37.41	86.99
PGSC0003DMT400032488	Potato	cytosol	37.06	86.89
PGSC0003DMT400012239	Potato	cytosol	37.06	86.89
VIT_02s0154g00390.t01	Wine grape	cytosol	38.46	84.62
KRH04111	Soybean	cytosol	37.76	84.38
VIT_15s0048g00660.t01	Wine grape	cytosol	36.36	83.87
KRH57384	Soybean	cytosol	38.81	82.84
CDX83397	Canola	cytosol	35.31	82.79
CDX95634	Canola	cytosol	34.97	81.97
CDY56249	Canola	cytosol	34.97	81.97
CDY32262	Canola	cytosol	34.97	81.97
CDX93087	Canola	cytosol	33.92	81.51
CDY50946	Canola	cytosol	33.57	80.67
CDY16657	Canola	cytosol	32.17	76.67
CDX94567	Canola	cytosol	31.82	75.83
CDX98722	Canola	cytosol	32.87	75.81
CDY07250	Canola	cytosol	31.47	75.63
CDX79116	Canola	cytosol	31.82	74.59
CDX82891	Canola	cytosol	31.82	74.59
CDX90515	Canola	plastid	46.85	73.22
AT4G16520.3	Thale cress	extracellular	30.77	72.73
CDY09685	Canola	plastid	46.5	71.89
CDX82890	Canola	cytosol	31.12	71.77
GSMUA_Achr8P11170_001	Banana	cytosol	30.42	70.16
KRH28060	Soybean	cytosol	37.76	70.13
CDX94071	Canola	cytosol	33.22	69.34
CDY24873	Canola	cytosol	22.38	68.09
CDY37030	Canola	cytosol	18.88	64.29
Solyc08g078820.2.1	Tomato	cytosol, plastid	42.31	61.11
GSMUA_Achr11P...	Banana	cytosol	26.22	60.48
CDY30087	Canola	cytosol	22.38	55.65
CDX97685	Canola	cytosol	22.38	55.65
CDY31453	Canola	cytosol	26.22	55.56
CDX74104	Canola	cytosol	20.28	48.74
CDY08051	Canola	cytosol	19.93	47.9
CDY24693	Canola	cytosol	19.58	47.06
CDY05263	Canola	cytosol	19.58	47.06

Protein Annotations

MapMan:19.3.3.1	Gene3D:3.10.20.90	GO:A0A078ILN5	UniProt:A0A078ILN5	InterPro:Atg8-like	EnsemblPlants:CDY50852
ProteinID:CDY50852	ProteinID:CDY50852.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00097595001
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF39	SUPFAM:SSF54236	UniParc:UPI0004EC2C63	InterPro:Ubiquitin-like_domsf
SEG:seg	:	:	:	:	:

Description

BnaC08g47980DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILN5]

Coordinates

chrLK032944:+:84368..86865

Molecular Weight (calculated)

33421.1 Da

IEP (calculated)

4.970

GRAVY (calculated)

-0.344

Length

286 amino acids

Sequence
(BLAST)

001: MYSSKIQQQI KNELATFVRE TLAEYKHDLH DEFIKSIEHA LVMLTQSQQQ EVLPQLDDVF SNEEGFDLIK EICGAPIFDV YEDELNTPEP IDILDLIIYD
101: MYNEDMPFEN FRSFVYLSNL HRKHRVLEKC FDRRKAFVFV INSFRRVSLC VRRKGLSLID GWGVEEEVMA KSTFKQEHDL EKRSAEAARI REKYPDRIPV
201: IVEKAEKSDI PTIDKKKYLV PADLTVGQFV YVIRKRIKLS AEKAIFIFVD NVLPPTGALM SAVYEEKKEE DGFLYVTYSG ENTFGY

Best Arabidopsis Sequence Match ( AT4G16520.2 )
(BLAST)

001: MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK
101: DDDGFLYVTY SGENTFGFGS P

Arabidopsis Description

ATG8FUbiquitin-like superfamily protein [Source:TAIR;Acc:AT4G16520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.