CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83397	Canola	cytosol	73.81	50.82
Bra003310.1-P	Field mustard	cytosol	72.62	50.0
CDX95634	Canola	cytosol	72.62	50.0
CDY56249	Canola	cytosol	72.62	50.0
AT2G45170.1	Thale cress	cytosol	71.43	49.18
Solyc08g007400.2.1	Tomato	cytosol	65.48	46.22
PGSC0003DMT400032488	Potato	cytosol	66.67	45.9
CDY68526	Canola	cytosol	64.29	45.76
CDY40540	Canola	cytosol	64.29	45.38
PGSC0003DMT400012239	Potato	cytosol	65.48	45.08
KRH77376	Soybean	cytosol	65.48	44.72
KRH04111	Soybean	cytosol	65.48	42.97
CDX93087	Canola	cytosol	60.71	42.86
CDY50946	Canola	cytosol	60.71	42.86
VIT_02s0154g00390.t01	Wine grape	cytosol	65.48	42.31
VIT_15s0048g00660.t01	Wine grape	cytosol	61.9	41.94
CDY32262	Canola	cytosol	60.71	41.8
KRH57384	Soybean	cytosol	64.29	40.3
GSMUA_Achr8P11170_001	Banana	cytosol	58.33	39.52
CDY24873	Canola	cytosol	44.05	39.36
CDY07250	Canola	cytosol	54.76	38.66
CDY16657	Canola	cytosol	54.76	38.33
CDX94567	Canola	cytosol	54.76	38.33
CDX79116	Canola	cytosol	52.38	36.07
CDX82891	Canola	cytosol	52.38	36.07
KRH28060	Soybean	cytosol	65.48	35.71
CDX98722	Canola	cytosol	52.38	35.48
CDX82890	Canola	cytosol	52.38	35.48
CDX97685	Canola	cytosol	45.24	33.04
CDY30087	Canola	cytosol	45.24	33.04
GSMUA_Achr11P...	Banana	cytosol	47.62	32.26
CDX94071	Canola	cytosol	52.38	32.12
CDX90515	Canola	plastid	65.48	30.05
CDY09685	Canola	plastid	64.29	29.19
CDX74104	Canola	cytosol	40.48	28.57
Solyc08g078820.2.1	Tomato	cytosol, plastid	65.48	27.78
CDY24693	Canola	cytosol	39.29	27.73
CDY08051	Canola	cytosol	39.29	27.73
CDY05263	Canola	cytosol	38.1	26.89
CDY31453	Canola	cytosol	39.29	24.44
CDY50852	Canola	cytosol	64.29	18.88

Protein Annotations

MapMan:19.3.3.1	Gene3D:3.10.20.90	GO:A0A078HF88	UniProt:A0A078HF88	InterPro:Atg8-like	EnsemblPlants:CDY37030
ProteinID:CDY37030	ProteinID:CDY37030.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00063233001
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF31	SUPFAM:SSF54236	UniParc:UPI0004EEC502	InterPro:Ubiquitin-like_domsf

Description

BnaA04g26080DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF88]

Coordinates

chrLK032390:+:75928..76658

Molecular Weight (calculated)

9543.7 Da

IEP (calculated)

7.354

GRAVY (calculated)

-0.044

Length

84 amino acids

Sequence
(BLAST)

1: MYVFLSLQDG VCLEKRQAES LRIIEKYPDR IHVIVEKAEK FEIPNIDKKK IKLSSEKAIF IYVDNVLPPT GEILSSTTFG ASSI

Best Arabidopsis Sequence Match ( AT2G45170.1 )
(BLAST)

001: MNKGSIFKMD NDFEKRKAEA GRIREKYPDR IPVIVEKAEK SEVPNIDKKK YLVPSDLTVG QFVYVIRKRI KLSAEKAIFI FVDNVLPPTG ELMSSVYEDK
101: KDEDGFLYIT YSGENTFGAS SI

Arabidopsis Description

ATG8EAutophagy-related protein 8e [Source:UniProtKB/Swiss-Prot;Acc:Q8S926]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.