Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83397 | Canola | cytosol | 97.54 | 97.54 |
| CDX95634 | Canola | cytosol | 96.72 | 96.72 |
| AT2G45170.1 | Thale cress | cytosol | 92.62 | 92.62 |
| CDY40540 | Canola | cytosol | 82.79 | 84.87 |
| CDY68526 | Canola | cytosol | 81.97 | 84.75 |
| Solyc08g007400.2.1 | Tomato | cytosol | 81.15 | 83.19 |
| PGSC0003DMT400032488 | Potato | cytosol | 81.97 | 81.97 |
| PGSC0003DMT400012239 | Potato | cytosol | 81.15 | 81.15 |
| KRH77376 | Soybean | cytosol | 80.33 | 79.67 |
| VIT_15s0048g00660.t01 | Wine grape | cytosol | 79.51 | 78.23 |
| KRH04111 | Soybean | cytosol | 81.97 | 78.12 |
| VIT_02s0154g00390.t01 | Wine grape | cytosol | 82.79 | 77.69 |
| CDX93087 | Canola | cytosol | 74.59 | 76.47 |
| CDY50946 | Canola | cytosol | 73.77 | 75.63 |
| CDY32262 | Canola | cytosol | 74.59 | 74.59 |
| CDX94567 | Canola | cytosol | 72.95 | 74.17 |
| CDY16657 | Canola | cytosol | 72.95 | 74.17 |
| KRH57384 | Soybean | cytosol | 81.15 | 73.88 |
| CDY37030 | Canola | cytosol | 50.0 | 72.62 |
| CDX82891 | Canola | cytosol | 72.13 | 72.13 |
| CDX79116 | Canola | cytosol | 72.13 | 72.13 |
| CDX98722 | Canola | cytosol | 72.95 | 71.77 |
| GSMUA_Achr8P11170_001 | Banana | cytosol | 71.31 | 70.16 |
| CDY07250 | Canola | cytosol | 68.03 | 69.75 |
| CDX82890 | Canola | cytosol | 70.49 | 69.35 |
| CDX94071 | Canola | cytosol | 72.95 | 64.96 |
| KRH28060 | Soybean | cytosol | 81.15 | 64.29 |
| CDY24873 | Canola | cytosol | 48.36 | 62.77 |
| GSMUA_Achr11P... | Banana | cytosol | 60.66 | 59.68 |
| CDX90515 | Canola | plastid | 81.97 | 54.64 |
| CDY30087 | Canola | cytosol | 50.82 | 53.91 |
| CDX97685 | Canola | cytosol | 50.82 | 53.91 |
| CDY09685 | Canola | plastid | 81.15 | 53.51 |
| CDY31453 | Canola | cytosol | 58.2 | 52.59 |
| Solyc08g078820.2.1 | Tomato | cytosol, plastid | 81.15 | 50.0 |
| CDY24693 | Canola | cytosol | 47.54 | 48.74 |
| CDY05263 | Canola | cytosol | 47.54 | 48.74 |
| CDX74104 | Canola | cytosol | 47.54 | 48.74 |
| CDY08051 | Canola | cytosol | 46.72 | 47.9 |
| CDY50852 | Canola | cytosol | 81.97 | 34.97 |
Protein Annotations
| MapMan:19.3.3.1 | Gene3D:3.10.20.90 | GO:A0A078J010 | UniProt:A0A078J010 | InterPro:Atg8-like | EnsemblPlants:CDY56249 |
| ProteinID:CDY56249 | ProteinID:CDY56249.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006914 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00018013001 |
| PFAM:PF02991 | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF39 | SUPFAM:SSF54236 | UniParc:UPI0004EDEB34 | InterPro:Ubiquitin-like_domsf |
Description
BnaA07g38000DAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078J010]
Coordinates
chrLK033471:+:50288..51693
Molecular Weight (calculated)
13874.6 Da
IEP (calculated)
6.909
GRAVY (calculated)
-0.413
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKGSSFKLD NDFEKRKAEA GRILEKYPDR IPVIVEKAEK SDIPDIDKKK YLVPSDLTVG QFVYVIRKRI KLSAEKAIFI FVDNVLPPTG EIMSSVYEEK
101: KDQDGFLYIT YSGENTFGAS SI
101: KDQDGFLYIT YSGENTFGAS SI
001: MNKGSIFKMD NDFEKRKAEA GRIREKYPDR IPVIVEKAEK SEVPNIDKKK YLVPSDLTVG QFVYVIRKRI KLSAEKAIFI FVDNVLPPTG ELMSSVYEDK
101: KDEDGFLYIT YSGENTFGAS SI
101: KDEDGFLYIT YSGENTFGAS SI
Arabidopsis Description
ATG8EAutophagy-related protein 8e [Source:UniProtKB/Swiss-Prot;Acc:Q8S926]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.