Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001197.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY08051 | Canola | cytosol | 99.16 | 99.16 |
| AT3G06420.1 | Thale cress | cytosol | 91.6 | 91.6 |
| CDY05263 | Canola | cytosol | 87.39 | 87.39 |
| CDY24693 | Canola | cytosol | 86.55 | 86.55 |
| CDY30087 | Canola | cytosol | 68.07 | 70.43 |
| CDX97685 | Canola | cytosol | 68.07 | 70.43 |
| VIT_07s0005g02200.t01 | Wine grape | cytosol | 71.43 | 68.55 |
| GSMUA_Achr5P27270_001 | Banana | cytosol | 68.07 | 68.07 |
| KRH31741 | Soybean | cytosol | 68.07 | 66.39 |
| KRH69161 | Soybean | cytosol | 68.07 | 66.39 |
| PGSC0003DMT400013320 | Potato | cytosol | 65.55 | 65.55 |
| Solyc01g068060.2.1 | Tomato | cytosol | 64.71 | 64.71 |
| TraesCS5A01G158000.1 | Wheat | plasma membrane | 60.5 | 62.07 |
| TraesCS5B01G155700.1 | Wheat | cytosol | 59.66 | 61.21 |
| HORVU5Hr1G049440.1 | Barley | cytosol | 59.66 | 61.21 |
| TraesCS5D01G163400.1 | Wheat | cytosol | 54.62 | 59.63 |
| CDY07250 | Canola | cytosol | 54.62 | 54.62 |
| CDY16657 | Canola | cytosol | 53.78 | 53.33 |
| CDX94567 | Canola | cytosol | 52.94 | 52.5 |
| CDX93087 | Canola | cytosol | 52.1 | 52.1 |
| CDY50946 | Canola | cytosol | 52.1 | 52.1 |
| CDX98722 | Canola | cytosol | 53.78 | 51.61 |
| CDX82891 | Canola | cytosol | 52.1 | 50.82 |
| CDX79116 | Canola | cytosol | 52.1 | 50.82 |
| CDX82890 | Canola | cytosol | 52.1 | 50.0 |
| CDY68526 | Canola | cytosol | 48.74 | 49.15 |
| CDY56249 | Canola | cytosol | 48.74 | 47.54 |
| CDY40540 | Canola | cytosol | 47.06 | 47.06 |
| OQU75649 | Sorghum | cytosol | 43.7 | 46.85 |
| CDX83397 | Canola | cytosol | 47.9 | 46.72 |
| CDX94071 | Canola | cytosol | 53.78 | 46.72 |
| CDX95634 | Canola | cytosol | 47.06 | 45.9 |
| CDY32262 | Canola | cytosol | 43.7 | 42.62 |
| CDY24873 | Canola | cytosol | 32.77 | 41.49 |
| CDY37030 | Canola | cytosol | 28.57 | 40.48 |
| CDY31453 | Canola | cytosol | 45.38 | 40.0 |
| CDX90515 | Canola | plastid | 46.22 | 30.05 |
| CDY09685 | Canola | plastid | 46.22 | 29.73 |
| CDY50852 | Canola | cytosol | 48.74 | 20.28 |
Protein Annotations
| EnsemblPlants:CDX74104 | EnsemblPlantsGene:GSBRNA2T00111859001 | Gene3D:3.10.20.90 | GO:A0A078CD52 | InterPro:Atg8-like | InterPro:Ubiquitin-like_domsf |
| PANTHER:PTHR10969 | PANTHER:PTHR10969:SF25 | PFAM:PF02991 | ProteinID:CDX74104 | ProteinID:CDX74104.1 | SUPFAM:SSF54236 |
| UniParc:UPI0002540AB6 | MapMan:19.3.3.1 | : | : | : | : |
Description
BnaA03g29430D
Coordinates
chrLK031800:+:1337745..1339118
Molecular Weight (calculated)
13755.5 Da
IEP (calculated)
6.534
GRAVY (calculated)
-0.358
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIVVKSFKD QFSSEERLKE SSNIIAKYPD RVPVIIEKYS NADLPDMEKS KFLVPRDMTV GHFIHMLSNR LQLDPSKALF VFVQNTLPQT AARMDSLYNT
101: FKEEDGFLYM TYSTEKTFG
101: FKEEDGFLYM TYSTEKTFG
001: MGIVVKSFKD QFSSDERLKE SNNIIAKYPD RIPVIIEKYS NADLPDMEKN KYLVPRDMTV GHFIHMLSKR MQLDPSKALF VFVHNTLPQT ASRMDSLYNT
101: FKEEDGFLYM CYSTEKTFG
101: FKEEDGFLYM CYSTEKTFG
Arabidopsis Description
ATG8HAutophagy-related protein 8h [Source:UniProtKB/Swiss-Prot;Acc:Q8S925]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.