Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69161 | Soybean | cytosol | 98.36 | 98.36 |
| GSMUA_Achr5P27270_001 | Banana | cytosol | 72.95 | 74.79 |
| VIT_07s0005g02200.t01 | Wine grape | cytosol | 73.77 | 72.58 |
| Solyc01g068060.2.1 | Tomato | cytosol | 68.85 | 70.59 |
| PGSC0003DMT400013320 | Potato | cytosol | 68.03 | 69.75 |
| Bra001197.1-P | Field mustard | cytosol | 66.39 | 68.07 |
| CDX74104 | Canola | cytosol | 66.39 | 68.07 |
| CDY08051 | Canola | cytosol | 65.57 | 67.23 |
| AT3G06420.1 | Thale cress | cytosol | 64.75 | 66.39 |
| Bra020749.1-P | Field mustard | cytosol | 64.75 | 66.39 |
| CDY05263 | Canola | cytosol | 64.75 | 66.39 |
| TraesCS5B01G155700.1 | Wheat | cytosol | 63.11 | 66.38 |
| TraesCS5A01G158000.1 | Wheat | plasma membrane | 63.11 | 66.38 |
| HORVU5Hr1G049440.1 | Barley | cytosol | 62.3 | 65.52 |
| TraesCS5D01G163400.1 | Wheat | cytosol | 58.2 | 65.14 |
| CDY24693 | Canola | cytosol | 63.11 | 64.71 |
| KRH25368 | Soybean | cytosol | 55.74 | 56.67 |
| KRH56143 | Soybean | cytosol | 54.92 | 55.83 |
| KRH36460 | Soybean | cytosol, mitochondrion | 50.0 | 51.26 |
| KRH11438 | Soybean | cytosol, mitochondrion | 50.0 | 51.26 |
| KRH51096 | Soybean | cytosol | 52.46 | 49.61 |
| KRH02062 | Soybean | cytosol | 52.46 | 49.61 |
| OQU75649 | Sorghum | cytosol | 43.44 | 47.75 |
| KRH77376 | Soybean | cytosol | 47.54 | 47.15 |
| KRH04111 | Soybean | cytosol | 49.18 | 46.88 |
| KRH12706 | Soybean | cytosol | 27.87 | 46.58 |
| KRH57384 | Soybean | cytosol | 48.36 | 44.03 |
| KRH28060 | Soybean | cytosol | 48.36 | 38.31 |
Protein Annotations
| EntrezGene:100527345 | MapMan:19.3.3.1 | Gene3D:3.10.20.90 | EMBL:ACUP02006081 | InterPro:Atg8-like | EMBL:BT092179 |
| UniProt:C6T418 | EnsemblPlantsGene:GLYMA_10G009300 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006914 | GO:GO:0006950 | GO:GO:0006995 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | EnsemblPlants:KRH31741 | ProteinID:KRH31741 |
| ProteinID:KRH31741.1 | PFAM:PF02991 | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF25 | SUPFAM:SSF54236 | UniParc:UPI0001B15721 |
| InterPro:Ubiquitin-like_domsf | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:896609..897903
Molecular Weight (calculated)
14183.1 Da
IEP (calculated)
8.390
GRAVY (calculated)
-0.371
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGNSSFRDE YTFEQRLGES RDIVAKYPDR VPVIVERYAK CDLPELEKKK YLVPRDLSVG HFIHILSSRL SLPPGKALFV FVKNTLPQTA NMMDSVYRSF
101: KDEDGFLYMY YSTEKTFGSY IM
101: KDEDGFLYMY YSTEKTFGSY IM
001: MKSFKEQYTL DERLAESREI IAKYPTRIPV IAEKYCKTDL PAIEKKKFLV PRDMSVGQFI YILSARLHLS PGKALFVFVN NTLPQTAALM DSVYESYKDD
101: DGFVYMCYSS EKTFG
101: DGFVYMCYSS EKTFG
Arabidopsis Description
ATG8IAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBL7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.