CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36460	Soybean	cytosol, mitochondrion	100.0	100.0
GSMUA_Achr5P02890_001	Banana	cytosol	89.92	89.92
Os07t0512200-01	Rice	cytosol	86.55	86.55
TraesCS2A01G224000.1	Wheat	cytosol	86.55	86.55
TraesCS2B01G274200.1	Wheat	cytosol	86.55	86.55
TraesCS2D01G229900.1	Wheat	cytosol	86.55	86.55
KRH25368	Soybean	cytosol	86.55	85.83
PGSC0003DMT400042494	Potato	cytosol	88.24	85.37
Solyc02g080590.2.1	Tomato	cytosol	88.24	85.37
KRH02062	Soybean	cytosol	92.44	85.27
KRH56143	Soybean	cytosol	85.71	85.0
CDY16657	Canola	cytosol	85.71	85.0
Bra029509.1-P	Field mustard	cytosol	85.71	85.0
EER99442	Sorghum	cytosol	84.03	84.03
KRH51096	Soybean	cytosol	90.76	83.72
VIT_10s0116g01700.t01	Wine grape	cytosol	85.71	83.61
CDX94567	Canola	cytosol	84.03	83.33
CDX98722	Canola	cytosol	86.55	83.06
Bra019407.1-P	Field mustard	cytosol	86.55	83.06
CDX79116	Canola	cytosol	84.03	81.97
Bra013578.1-P	Field mustard	cytosol	84.03	81.97
CDX82891	Canola	cytosol	84.03	81.97
KRH12706	Soybean	cytosol	49.58	80.82
CDX82890	Canola	cytosol	83.19	79.84
AT4G04620.3	Thale cress	cytosol	81.51	79.51
KRH77376	Soybean	cytosol	80.67	78.05
CDX94071	Canola	cytosol	86.55	75.18
KRH04111	Soybean	cytosol	80.67	75.0
AT4G21980.2	Thale cress	cytosol	85.71	74.45
KRH57384	Soybean	cytosol	80.67	71.64
HORVU2Hr1G046860.2	Barley	cytosol, plastid	86.55	64.38
KRH28060	Soybean	cytosol	80.67	62.34
CDY31453	Canola	cytosol	70.59	62.22
KRH69161	Soybean	cytosol	52.1	50.82
KRH31741	Soybean	cytosol	51.26	50.0
Zm00001d006474_P002	Maize	nucleus	80.67	45.93

Protein Annotations

EntrezGene:100527884	EntrezGene:100784677	MapMan:19.3.3.1	Gene3D:3.10.20.90	EMBL:ACUP02005375	EMBL:ACUP02009209
InterPro:Atg8-like	EMBL:BT092766	UniProt:C6T5Q4	EnsemblPlantsGene:GLYMA_15G108200	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006914	GO:GO:0006950	GO:GO:0006995	GO:GO:0007154
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991
EnsemblPlants:KRH11438	ProteinID:KRH11438	ProteinID:KRH11438.1	ProteinID:KRH36460.1	ProteinID:KRH36461.1	ProteinID:KRH36462.1
PFAM:PF02991	PANTHER:PTHR10969	PANTHER:PTHR10969:SF47	SUPFAM:SSF54236	UniParc:UPI0001B15ED8	InterPro:Ubiquitin-like_domsf

Description

hypothetical protein

Coordinates

chr15:+:8512403..8514657

Molecular Weight (calculated)

13696.5 Da

IEP (calculated)

9.597

GRAVY (calculated)

-0.460

Length

119 amino acids

Sequence
(BLAST)

001: MAKTSFKLQH PLERRQAEAS RIREKYPDRI PVIVEKAERS DIPDIDKKKY LVPADLTVGQ FVYVVRKRIK LSAEKAIFVF INNTLPPTAA LMSAIYEENK
101: DQDGFLYMTY SGENTFGSH

Best Arabidopsis Sequence Match ( AT1G62040.1 )
(BLAST)

001: MANSSFKLEH PLERRQIESS RIREKYPDRI PVIVERAERS DVPNIDKKKY LVPADLTVGQ FVYVVRKRIK LSAEKAIFVF VKNTLPPTAA MMSAIYDENK
101: DEDGFLYMTY SGENTFGLV

Arabidopsis Description

ATG8CAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178W309]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.