Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0090g00580.t01 | Wine grape | cytosol | 86.07 | 88.24 |
| KRH36460 | Soybean | cytosol, mitochondrion | 83.61 | 85.71 |
| KRH11438 | Soybean | cytosol, mitochondrion | 83.61 | 85.71 |
| AT1G62040.1 | Thale cress | cytosol | 82.79 | 84.87 |
| GSMUA_Achr5P02890_001 | Banana | cytosol | 82.79 | 84.87 |
| EER99442 | Sorghum | cytosol | 81.15 | 83.19 |
| Os07t0512200-01 | Rice | cytosol | 81.15 | 83.19 |
| PGSC0003DMT400042494 | Potato | cytosol | 83.61 | 82.93 |
| Solyc02g080590.2.1 | Tomato | cytosol | 83.61 | 82.93 |
| TraesCS2A01G224000.1 | Wheat | cytosol | 80.33 | 82.35 |
| TraesCS2B01G274200.1 | Wheat | cytosol | 80.33 | 82.35 |
| TraesCS2D01G229900.1 | Wheat | cytosol | 80.33 | 82.35 |
| CDY07250 | Canola | cytosol | 79.51 | 81.51 |
| VIT_12s0059g00660.t01 | Wine grape | cytosol | 80.33 | 80.99 |
| KRH51096 | Soybean | cytosol | 84.43 | 79.84 |
| KRH02062 | Soybean | cytosol | 83.61 | 79.07 |
| VIT_15s0048g00660.t01 | Wine grape | cytosol | 78.69 | 77.42 |
| Bra021303.1-P | Field mustard | cytosol | 51.64 | 75.9 |
| VIT_02s0154g00390.t01 | Wine grape | cytosol | 78.69 | 73.85 |
| CDY24873 | Canola | cytosol | 54.1 | 70.21 |
| HORVU2Hr1G046860.2 | Barley | cytosol, plastid | 80.33 | 61.25 |
| VIT_07s0005g02200.t01 | Wine grape | cytosol | 51.64 | 50.81 |
| Zm00001d006474_P002 | Maize | nucleus | 80.33 | 46.89 |
Protein Annotations
| EntrezGene:100247055 | wikigene:100247055 | MapMan:19.3.3.1 | Gene3D:3.10.20.90 | InterPro:Atg8-like | ProteinID:CCB48213 |
| ProteinID:CCB48213.1 | UniProt:F6H7L8 | EMBL:FN595248 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006914 | GO:GO:0006950 | GO:GO:0006995 | GO:GO:0007154 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | EntrezGene:LOC100247055 |
| wikigene:LOC100247055 | PFAM:PF02991 | PANTHER:PTHR10969 | PANTHER:PTHR10969:SF47 | SUPFAM:SSF54236 | UniParc:UPI000198419B |
| InterPro:Ubiquitin-like_domsf | ArrayExpress:VIT_10s0116g01700 | EnsemblPlantsGene:VIT_10s0116g01700 | EnsemblPlants:VIT_10s0116g01700.t01 | unigene:Vvi.12172 | RefSeq:XP_002273587 |
| RefSeq:XP_002273587.1 | RefSeq:XP_019078316.1 | : | : | : | : |
Description
Autophagy-related protein [Source:UniProtKB/TrEMBL;Acc:F6H7L8]
Coordinates
chr10:-:947481..951276
Molecular Weight (calculated)
13959.9 Da
IEP (calculated)
10.104
GRAVY (calculated)
-0.428
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSSSNFKL EHPLEKRQTE AARIRKKHPD RIPVIVEKAN RSDIPSIDKK KYLVPADLTV GQFVYVIRKR IKLSAEKAIF VFVKNTLPST AALMSAIYEE
101: NKDEDGFLYM TYSGENTFGF CK
101: NKDEDGFLYM TYSGENTFGF CK
001: MANSSFKLEH PLERRQIESS RIREKYPDRI PVIVERAERS DVPNIDKKKY LVPADLTVGQ FVYVVRKRIK LSAEKAIFVF VKNTLPPTAA MMSAIYDENK
101: DEDGFLYMTY SGENTFGLV
101: DEDGFLYMTY SGENTFGLV
Arabidopsis Description
ATG8CAutophagy-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178W309]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.