Factsheet for GSMUA_Achr11P04350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P11170_001	Banana	cytosol	78.23	78.23
VIT_15s0048g00660.t01	Wine grape	cytosol	64.52	64.52
AT2G45170.1	Thale cress	cytosol	62.9	63.93
Solyc08g007400.2.1	Tomato	cytosol	61.29	63.87
Bra040738.1-P	Field mustard	cytosol	60.48	63.56
CDY68526	Canola	cytosol	60.48	63.56
PGSC0003DMT400032488	Potato	cytosol	61.29	62.3
KRH77376	Soybean	cytosol	61.29	61.79
Bra003310.1-P	Field mustard	cytosol	60.48	61.48
CDY40540	Canola	cytosol	58.87	61.34
AT3G60640.1	Thale cress	cytosol	59.68	61.16
Bra038481.1-P	Field mustard	cytosol, mitochondrion	40.32	60.98
Bra000376.1-P	Field mustard	cytosol	59.68	60.66
CDY56249	Canola	cytosol	59.68	60.66
PGSC0003DMT400012239	Potato	cytosol	59.68	60.66
CDX83397	Canola	cytosol	59.68	60.66
CDX95634	Canola	cytosol	58.87	59.84
Bra012710.1-P	Field mustard	cytosol	57.26	59.66
KRH04111	Soybean	cytosol	61.29	59.38
VIT_02s0154g00390.t01	Wine grape	cytosol	62.1	59.23
GSMUA_Achr4P21280_001	Banana	cytosol	56.45	58.82
GSMUA_Achr5P02890_001	Banana	cytosol	56.45	58.82
GSMUA_Achr2P12710_001	Banana	cytosol	55.65	57.98
GSMUA_Achr4P23720_001	Banana	cytosol	41.94	57.78
GSMUA_Achr10P...	Banana	cytosol	54.84	57.14
KRH57384	Soybean	cytosol	61.29	56.72
CDY32262	Canola	cytosol	54.03	54.92
GSMUA_Achr4P27720_001	Banana	cytosol	54.84	53.97
AT4G16520.3	Thale cress	extracellular	50.0	51.24
KRH28060	Soybean	cytosol	62.1	50.0
GSMUA_Achr5P27270_001	Banana	cytosol	45.97	47.9
CDY37030	Canola	cytosol	32.26	47.62
GSMUA_Achr4P33470_001	Banana	mitochondrion	26.61	41.25
CDX90515	Canola	plastid	58.06	39.34
CDY09685	Canola	plastid	58.06	38.92
Solyc08g078820.2.1	Tomato	cytosol, plastid	59.68	37.37
CDY50852	Canola	cytosol	60.48	26.22

Protein Annotations

EnsemblPlants:GSMUA_Achr11P04350_001	EnsemblPlants:GSMUA_Achr11T04350_001	EnsemblPlantsGene:GSMUA_Achr11G04350_001	Gene3D:3.10.20.90	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	InterPro:Atg8-like	InterPro:Ubiquitin-like_domsf	PANTHER:PTHR10969	PANTHER:PTHR10969:SF31	PFAM:PF02991
SUPFAM:SSF54236	UniParc:UPI000295B72A	UniProt:M0RPB5	MapMan:19.3.3.1	:	:

Description

Autophagy-related protein 8f [Source:GMGC_GENE;Acc:GSMUA_Achr11G04350_001]

Coordinates

chr11:-:3212885..3216559

Molecular Weight (calculated)

14396.0 Da

IEP (calculated)

6.254

GRAVY (calculated)

-0.659

Length

124 amino acids

Sequence
(BLAST)

001: MSRSQSNFKQ QHEFEQRKTE SQWIKDKYPG RFPVIVEKAD TSDVPNIDKQ KYLVPGEMTF GQFVHIIHKS INTGAEKAIF MFVDNALPPT GILMSRLYDD
101: KKDEDGFLYF VYSGENTFGC QNMQ

Best Arabidopsis Sequence Match ( AT2G45170.1 )
(BLAST)

001: MNKGSIFKMD NDFEKRKAEA GRIREKYPDR IPVIVEKAEK SEVPNIDKKK YLVPSDLTVG QFVYVIRKRI KLSAEKAIFI FVDNVLPPTG ELMSSVYEDK
101: KDEDGFLYIT YSGENTFGAS SI

Arabidopsis Description

ATG8EAutophagy-related protein 8e [Source:UniProtKB/Swiss-Prot;Acc:Q8S926]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.