Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G044850.1 | Barley | extracellular | 17.72 | 73.75 |
| HORVU4Hr1G002770.4 | Barley | extracellular | 20.72 | 34.5 |
| HORVU4Hr1G002780.1 | Barley | plastid | 23.12 | 24.06 |
| TraesCS4B01G029900.1 | Wheat | plasma membrane | 24.02 | 23.19 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G002310.1 | EnsemblPlantsGene:HORVU4Hr1G002310 | Gene3D:1.20.1280.290 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:SWEET_sugar_transpr |
| PANTHER:PTHR10791 | PANTHER:PTHR10791:SF105 | PFAM:PF03083 | PFAM:PF14368 | SEG:seg | SUPFAM:SSF47699 |
| TMHMM:TMhelix | UniParc:UPI000B482B06 | UniProt:A0A287MXB4 | MapMan:24.2.6.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:4215950..4219211
Molecular Weight (calculated)
35570.0 Da
IEP (calculated)
9.505
GRAVY (calculated)
0.487
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: TAQCCEPVVA AVDLGGGVPC LCRVAAEPPL VMAGLNASHL LKLYTSCGGL QDGARFAAAC EGLAPSPAAV VSSLPPSPSR RRKQATHDAT ALPPSSKKPS
101: SLSPSPQQNV GAAPAESKSM ELVFLVLGYV FTGVLYLSPI PTIWQIATTN EVGMYKPDVH VLTLGSCVIG LLYGVPDPFK KGPVIFNAVG ILIQIVYLGI
201: FFRSSTAAQR RTVLFHLVMI GGAVAMQALL VFLLCPQPRY RYMLSICVAG MTTGMYSGPV RQMLTVWATK NVNHMSIWMA GASLFSGIFR TVYAFLTRDW
301: FGFAAYIIGA VSGLVQLTLF LTVKFRYQQQ PGA
101: SLSPSPQQNV GAAPAESKSM ELVFLVLGYV FTGVLYLSPI PTIWQIATTN EVGMYKPDVH VLTLGSCVIG LLYGVPDPFK KGPVIFNAVG ILIQIVYLGI
201: FFRSSTAAQR RTVLFHLVMI GGAVAMQALL VFLLCPQPRY RYMLSICVAG MTTGMYSGPV RQMLTVWATK NVNHMSIWMA GASLFSGIFR TVYAFLTRDW
301: FGFAAYIIGA VSGLVQLTLF LTVKFRYQQQ PGA
001: MTDPHTARTI VGIVGNVISF GLFCAPIPTM VKIWKMKSVS EFKPDPYVAT VLNCMMWTFY GLPFVQPDSL LVITINGTGL FMELVYVTIF FVFATSPVRR
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA
Arabidopsis Description
SWEET5Bidirectional sugar transporter SWEET5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM10]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.