Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G002770.4 | Barley | extracellular | 81.25 | 32.5 |
| HORVU4Hr1G002310.1 | Barley | peroxisome, plasma membrane | 73.75 | 17.72 |
| HORVU4Hr1G002780.1 | Barley | plastid | 66.25 | 16.56 |
| TraesCS4B01G029900.1 | Wheat | plasma membrane | 67.5 | 15.65 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G044850.1 | EnsemblPlantsGene:HORVU6Hr1G044850 | Gene3D:1.10.110.10 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | PFAM:PF14368 |
| SEG:seg | SUPFAM:SSF47699 | UniParc:UPI000B479349 | UniProt:A0A287U2P4 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr6H:+:258715842..258725826
Molecular Weight (calculated)
8167.0 Da
IEP (calculated)
5.680
GRAVY (calculated)
0.338
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MPTAQCCEPV VAAVVLGGGV PCLCRVAAEP QLVMAGLNAS HLLKLYTSCG GLQDGARLTA ACEGTNTSQT CMLDSGRRVE
001: MAIFSTAQPL SLPRHPNFSN PNQPTTNNER SRHISLIERC VSLRQLKQTH GHMIRTGTFS DPYSASKLFA MAALSSFASL EYARKVFDEI PKPNSFAWNT
101: LIRAYASGPD PVLSIWAFLD MVSESQCYPN KYTFPFLIKA AAEVSSLSLG QSLHGMAVKS AVGSDVFVAN SLIHCYFSCG DLDSACKVFT TIKEKDVVSW
201: NSMINGFVQK GSPDKALELF KKMESEDVKA SHVTMVGVLS ACAKIRNLEF GRQVCSYIEE NRVNVNLTLA NAMLDMYTKC GSIEDAKRLF DAMEEKDNVT
301: WTTMLDGYAI SEDYEAAREV LNSMPQKDIV AWNALISAYE QNGKPNEALI VFHELQLQKN MKLNQITLVS TLSACAQVGA LELGRWIHSY IKKHGIRMNF
401: HVTSALIHMY SKCGDLEKSR EVFNSVEKRD VFVWSAMIGG LAMHGCGNEA VDMFYKMQEA NVKPNGVTFT NVFCACSHTG LVDEAESLFH QMESNYGIVP
501: EEKHYACIVD VLGRSGYLEK AVKFIEAMPI PPSTSVWGAL LGACKIHANL NLAEMACTRL LELEPRNDGA HVLLSNIYAK LGKWENVSEL RKHMRVTGLK
601: KEPGCSSIEI DGMIHEFLSG DNAHPMSEKV YGKLHEVMEK LKSNGYEPEI SQVLQIIEEE EMKEQSLNLH SEKLAICYGL ISTEAPKVIR VIKNLRVCGD
701: CHSVAKLISQ LYDREIIVRD RYRFHHFRNG QCSCNDFW
101: LIRAYASGPD PVLSIWAFLD MVSESQCYPN KYTFPFLIKA AAEVSSLSLG QSLHGMAVKS AVGSDVFVAN SLIHCYFSCG DLDSACKVFT TIKEKDVVSW
201: NSMINGFVQK GSPDKALELF KKMESEDVKA SHVTMVGVLS ACAKIRNLEF GRQVCSYIEE NRVNVNLTLA NAMLDMYTKC GSIEDAKRLF DAMEEKDNVT
301: WTTMLDGYAI SEDYEAAREV LNSMPQKDIV AWNALISAYE QNGKPNEALI VFHELQLQKN MKLNQITLVS TLSACAQVGA LELGRWIHSY IKKHGIRMNF
401: HVTSALIHMY SKCGDLEKSR EVFNSVEKRD VFVWSAMIGG LAMHGCGNEA VDMFYKMQEA NVKPNGVTFT NVFCACSHTG LVDEAESLFH QMESNYGIVP
501: EEKHYACIVD VLGRSGYLEK AVKFIEAMPI PPSTSVWGAL LGACKIHANL NLAEMACTRL LELEPRNDGA HVLLSNIYAK LGKWENVSEL RKHMRVTGLK
601: KEPGCSSIEI DGMIHEFLSG DNAHPMSEKV YGKLHEVMEK LKSNGYEPEI SQVLQIIEEE EMKEQSLNLH SEKLAICYGL ISTEAPKVIR VIKNLRVCGD
701: CHSVAKLISQ LYDREIIVRD RYRFHHFRNG QCSCNDFW
Arabidopsis Description
PCMP-H33Pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82380]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.